Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00832 ATGGTGAGGAAAAGAAAGGCTGGAGAGGGGGGAGAAGAGAAAGATTACAGTGATGGAAGCATGGGGTGGGATGAGATGGTGAAGGAGGCAACAGAAGCAGCAGTGCTAGGGGGAGCACGTCGAGCGCGAAAGCGATTCGTTGGGGTGCGACAAAGGCCATCGGGCCGATGGGTGGCGGAGATCAAGGATACTATACAGAAGATAAGGGTGTGGTTGGGCACTTTTGATACTGCTGAGGAAGCTGCCAGGGCCTATGATGAGGCTGCCTGCTTGCTCCGCGGCGCGAACACCCGCACAAATTTCTGGCCATGCTCACCATCATCTTCTTCAACCCCAGCTCTTCCATCAAAGATTTCCAACCTCCTCCTCCTCAGGCTAAAAGCCAGAAATAACGCGTCCACTCCTATGTCTACTTTGTCAAGAAACCAGCAGCAACAACAACAAGAAGAATATAGAGAAGAAGCAACAGAATTAGTACAAGATACCCAATTGGATGATTTCTTCAACGAGCCCGATGAGTCCACGATCAACGACAACAATACTACTACTTCTATTACCACTACTAGTGATGACATGACTGCAAGTCTTGAATCCAATTTCACTGAAAAAGATGGTGTAGTAGAAGAATTGGACATGGACTATAACTGGGGTGAGGTGGGTGAGGGTCAGTCCCCAGGTGGTGAAAGTTACTGTGGAGGGGAAGGAGAAGAAGAAGGGGAAGAAGGAGAAGGTGTTGATCTAGGTGTTATGGATTTCCAATTCGTGGATGTTGCTGGGTCATCTTGTTACTATTATCCGTTCGACATTGCAGAAGAGATCGTGGAGCCAATGGAGCAGGAGAATGATGGGGACGATCCTTCGATGCTTAGAGCAGCGATGAAGAGGATGAAGTATGAGAGGAAGTTCTCGGCATCTCTCTACGCCTTCAATGGAATCTCTGAGTGCTTAAAGTTGAAGCTTGGATCAGGAAGTGAGAAAGGAAGAGGAAGGTCTGATCACCACTTGACCAACCTTGCAAAGACCTGCAATAAAAATCAAGAGGAGAAGAAAGAGGAAGACGAAGATGTTGAGGTGCAAGTGCAGAAGCAGGAGGACCACCTACAGATTTCAACAGACAACGGATCATCTTTGTCTTCTTCCACTTCTTCTTTGAGCAACGATGGCGAATTATCCCTTTGGAGCTCTCTTGATCTCTCTCCCATCTGCTTTGTTACTTAG 1218 0.4762 MVRKRKAGEGGEEKDYSDGSMGWDEMVKEATEAAVLGGARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSPSSSSTPALPSKISNLLLLRLKARNNASTPMSTLSRNQQQQQQEEYREEATELVQDTQLDDFFNEPDESTINDNNTTTSITTTSDDMTASLESNFTEKDGVVEELDMDYNWGEVGEGQSPGGESYCGGEGEEEGEEGEGVDLGVMDFQFVDVAGSSCYYYPFDIAEEIVEPMEQENDGDDPSMLRAAMKRMKYERKFSASLYAFNGISECLKLKLGSGSEKGRGRSDHHLTNLAKTCNKNQEEKKEEDEDVEVQVQKQEDHLQISTDNGSSLSSSTSSLSNDGELSLWSSLDLSPICFVT* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00832 405 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 305 - -
Eupl11g00832 405 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Eupl11g00832 405 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Eupl11g00832 405 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Eupl11g00832 405 Coils Coil 141 161 - -
Eupl11g00832 405 MobiDBLite consensus disorder prediction 1 20 - -
Eupl11g00832 405 MobiDBLite consensus disorder prediction 363 389 - -
Eupl11g00832 405 FunFam ethylene-responsive transcription factor RAP2-11 44 103 - -
Eupl11g00832 405 MobiDBLite consensus disorder prediction 218 242 - -
Eupl11g00832 405 MobiDBLite consensus disorder prediction 173 187 - -
Eupl11g00832 405 CDD AP2 44 101 IPR001471 GO:0003700|GO:0006355
Eupl11g00832 405 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Eupl11g00832 405 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Eupl11g00832 405 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Eupl11g00832 405 MobiDBLite consensus disorder prediction 168 187 - -
Eupl11g00832 405 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Eupl11g00832 405 MobiDBLite consensus disorder prediction 133 153 - -
Eupl11g00832 405 MobiDBLite consensus disorder prediction 323 389 - -
Eupl11g00832 405 MobiDBLite consensus disorder prediction 323 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00832 Eupl-Chr11 10726152 10727369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00832 43 122 AP2-EREBP Transcription Factor Family AT5G19790 73.750 1.65e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl11g00832 AP2 7.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00832 K09286 - vvi:100259331 435.647