Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00822 ATGAGAGGATTTGGTGCATTTGGATTTGATTCAGTTGTTATGGAGTGTAAAGAGAGTAGTCTTCTTGGAAAAGATGGCAGTGGCAGCGGTGGCGGTAATGGTAATGGTAATGGTATTCCTTTTCTTGATCGCAGCAAAGTGAGGATTCTGTTGTGTGACAACAATGTTAAGAGCTCTGAACAAGCTTTCTCACTTCTATGCAATTGCTCCTATCAAGTAACTTCAGTGAGGACAGCCAGACAGGTGATTGATGCACTTAATGCTGAGGGGACTGATATCGATATCATACTTGCGGAGGTGGACCTTCCAATAGCCAAAGGATTGAAAATGTTGAAGTACATTATGCGGGATAAAGGGTTGCGGCGCATTCCCATTATCATGATGTCTGCTCAAGATGAGGTCTCTGTCGTTGTCAAGTGCTTGAGACTTGGAGCAGCCGACTATCTTGTGAAGCCGTTACGCACTAATGAGCTATTGAATTTGTGGACTCACATGTGGAGAAGAAGGCACATGCTTGGACTGGTGGAGAAGAACATTCTGAATTATGACTTTGATCTGGTAGCATCAGACCCCAGTGATGCTAATACTAACAGCACTACAATATTCTCAGATGACACAGATGACAAGTCCCGAAGGAGTGCTCTTCCGGAGAAGAGCGTGTCAAATATTCAGGAAGATGAATCAAATGCTGCTGCCTCTGTAGAGTTTCCACCCAAGAATTCGTCGGAATATCACACTGAAGTGCCGGGGCCTAATGATCCACTAATGGGCCATATTTCATCTTTTCCAAAGAAGAGCGAACTAAAGATTGGTGAATCTTCAGCCTTCTTTACATACATCAAATCAAGTGTGCCCAGAAGCAGCTCTCAAAAGATTGGCTGCATTGATGAAAATGTAGTTCAATCAGAACGCTTGAGCAAGCTTCCACCATGGGCTAAACAAGTCAGCGATGATGTTCTTAGACGTGATAATCAAGAAGCATGGGAAAACTACTCCCGTAGAAAGGGTTTCCCAAGCAGTGACAATGGCCCTGATACCACTTCTGCTGATAGGTCATGTGCACCCCCTGTGCCATTGGAGTTTCCACAAGGAAGGAACTCCGAGGATGAGCCCTCTACAGTGTTGTTACATCCAAGCAACGAAACCCAATTTGATGTTTCAGGTGTTCCGTTACTCACTCCTTTGCCCTATCATCTGTCAGGAATGATGAATCAAGTTATGATGCCTTCATCTGCACAACTTTATCAAGGGAACTTGCATGATTTGTCAAAGCATCCAACTTCAGATATGTTGCCTCAGTACAATCCACTCCTACAGTGTCCTCCTCATGTACCTATGATGGCAAACTTCCCCTATTACCCAGTCCATTTATGTCTGCAACCAGGTCAAATGCCCACAACCCACATGTGGCCATCTACTGCTAACTCATCTTCCACTGAGGTGAAATCGGCTCGAGTTGAAAGAAGAGAGGCAGCACTGATCAAGTTTAGGCAGAAGAGGAAAGATCGATGTTTTAACAAGAAGATCAGGTACATCAACCGGAAGCGACTCGCTGAGACGAGGCCCCGTGTGCGGGGCCAGTTTGTGAGGCAGGTGAATGGTGTGGATATTGATTTTAATGGCCAACCTGCTTCTGTTGATGATTCTGATGAGGATGAAGATGAGGAGGAACTTGTATCTAGGGATTCTTTTCCTGAGGATTATGCTTAG 1710 0.4485 MRGFGAFGFDSVVMECKESSLLGKDGSGSGGGNGNGNGIPFLDRSKVRILLCDNNVKSSEQAFSLLCNCSYQVTSVRTARQVIDALNAEGTDIDIILAEVDLPIAKGLKMLKYIMRDKGLRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMLGLVEKNILNYDFDLVASDPSDANTNSTTIFSDDTDDKSRRSALPEKSVSNIQEDESNAAASVEFPPKNSSEYHTEVPGPNDPLMGHISSFPKKSELKIGESSAFFTYIKSSVPRSSSQKIGCIDENVVQSERLSKLPPWAKQVSDDVLRRDNQEAWENYSRRKGFPSSDNGPDTTSADRSCAPPVPLEFPQGRNSEDEPSTVLLHPSNETQFDVSGVPLLTPLPYHLSGMMNQVMMPSSAQLYQGNLHDLSKHPTSDMLPQYNPLLQCPPHVPMMANFPYYPVHLCLQPGQMPTTHMWPSTANSSSTEVKSARVERREAALIKFRQKRKDRCFNKKIRYINRKRLAETRPRVRGQFVRQVNGVDIDFNGQPASVDDSDEDEDEEELVSRDSFPEDYA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00822 569 ProSiteProfiles CCT domain profile. 489 531 IPR010402 GO:0005515
Eupl11g00822 569 MobiDBLite consensus disorder prediction 335 349 - -
Eupl11g00822 569 SUPERFAMILY CheY-like 43 172 IPR011006 -
Eupl11g00822 569 MobiDBLite consensus disorder prediction 330 375 - -
Eupl11g00822 569 SMART REC_2 47 162 IPR001789 GO:0000160
Eupl11g00822 569 Pfam CCT motif 489 531 IPR010402 GO:0005515
Eupl11g00822 569 ProSiteProfiles Response regulatory domain profile. 48 166 IPR001789 GO:0000160
Eupl11g00822 569 MobiDBLite consensus disorder prediction 195 250 - -
Eupl11g00822 569 MobiDBLite consensus disorder prediction 216 240 - -
Eupl11g00822 569 MobiDBLite consensus disorder prediction 539 569 - -
Eupl11g00822 569 Pfam Response regulator receiver domain 49 160 IPR001789 GO:0000160
Eupl11g00822 569 Gene3D - 47 235 - -
Eupl11g00822 569 MobiDBLite consensus disorder prediction 545 561 - -
Eupl11g00822 569 PANTHER TWO-COMPONENT RESPONSE REGULATOR 47 227 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00822 Eupl-Chr11 10562426 10570353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00822 31 569 Response Regulator Gene Family AT5G61380 46.593 3.04e-158 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Eupl11g00822 Response_reg 4.1e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00822 K12127 - ming:122086466 758.444