LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g00819	ATGAGTGAAAAAGGAGAGAACTCGGCCTCCGTGGCGGAGAAGCAGAAGGAGAAGGCTCGGGTGAGCAGGACGTCGCTGATCCTCTGGCACGCGCACCAGAACGATGCCGCTGCTGTTCGAAAGCTTCTGGAGGAAGACCGGTCTCTCGTTCACGCCAGAGATTACGACAATAGGACTCCCTTACATGTCGCTTCCCTCCATGGTTGGATCCATGCCGCTAAATGTCTTCTCGAATACGGCGCCGATGTAAATGCTCAGGATCGCTGGAAGAACACTCCCCTAGCTGATGCTGAAGGAGCTAAGAAACATAAAATGATCGAGCTTTTGAAATCATACGGTGGTTCATCTTATGGACAAAATGGCAGCCATTTTGAACCAAAGCCAGTTCCACCCCCTCTGCCAAAGAAGTGTGACTGGGAAATTGACCCGTCTGAGCTGGATTTCTCAAACTCAAATATGATCGGAAAGGGGTCGTTCGGTGAGATTTTGAAAGCTTTTTGGCGTGGAACACCAGTAGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAGATTGGTGATCCAGGACTTCAGGCATGAGGTCAATTTGCTAGTGAAGCTCCGCCACCCCAATATTGTCCAATTCCTTGGGGCAGTCACTGAGAAGAAGCCTCTAATGTTAATCACCGAGTATCTGCGAGGGGGTGATCTCCATCAGTACCTTAAGGAAAAGGGTTCACTTAATCCATCAACAGCTATTAACTTTGCGTTAGACATTGCCAGGGGCATGACTTATCTCCATAATGAGCCAAATGTCATAATTCACCGAGATCTAAAGCCAAGGAATGTTCTTTTAGTCAACTCCAATGCAGACCATTTGAAGGTTGGTGACTTTGGATTAAGCAAGCTCATCAAGGTTCAAAATTCTCATGATGTGTACAAAATGACTGGAGAGACTGGAAGCTACCGCTATATGGCTCCTGAAGTCTTCAAGCATCGGAAATATGATAAGAAGGTTGATGTTTTTTCTTTCGCAATGATATTATATGAGATGCTTGAAGGGGATCCTCCATTTGCAAATTATGAACCTTATGAAGCAGCAAAATGTGTGGCAGAAGGAAACAGGCCCGGGTTTCGTGCAAAAGGCTACCTCCCTGATCTGAGAGAGCTGACGGAGCATTGCTGGGCTGCTGACATGAGCCTGAGGCCTTCTTTTCTAGAGATCCTCAAGAAGCTCGAAAAGATTAAGGAGAGCCTACCAACGGATCACCACTGGAACATCTTTAACTCATAG	1275	0.4659	MSEKGENSASVAEKQKEKARVSRTSLILWHAHQNDAAAVRKLLEEDRSLVHARDYDNRTPLHVASLHGWIHAAKCLLEYGADVNAQDRWKNTPLADAEGAKKHKMIELLKSYGGSSYGQNGSHFEPKPVPPPLPKKCDWEIDPSELDFSNSNMIGKGSFGEILKAFWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKEKGSLNPSTAINFALDIARGMTYLHNEPNVIIHRDLKPRNVLLVNSNADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPFANYEPYEAAKCVAEGNRPGFRAKGYLPDLRELTEHCWAADMSLRPSFLEILKKLEKIKESLPTDHHWNIFNS*	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl11g00819	424	ProSiteProfiles	Ankyrin repeat region circular profile.	56	88	-	-
	Eupl11g00819	424	Gene3D	Phosphorylase Kinase; domain 1	132	227	-	-
	Eupl11g00819	424	ProSiteProfiles	Protein kinase domain profile.	148	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl11g00819	424	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	78	411	-	-
	Eupl11g00819	424	PIRSF	ILK	1	424	-	-
	Eupl11g00819	424	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	267	279	IPR008271	GO:0004672\|GO:0006468
	Eupl11g00819	424	SUPERFAMILY	Ankyrin repeat	27	122	IPR036770	-
	Eupl11g00819	424	CDD	STKc_MAP3K-like	154	406	-	-
	Eupl11g00819	424	Gene3D	-	1	126	IPR036770	-
	Eupl11g00819	424	Pfam	Protein tyrosine and serine/threonine kinase	151	406	IPR001245	GO:0004672\|GO:0006468
	Eupl11g00819	424	ProSiteProfiles	Ankyrin repeat profile.	56	88	IPR002110	GO:0005515
	Eupl11g00819	424	FunFam	Integrin-linked protein kinase family	227	422	-	-
	Eupl11g00819	424	SMART	serkin_6	148	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl11g00819	424	SMART	ANK_2a	56	85	IPR002110	GO:0005515
	Eupl11g00819	424	Gene3D	Transferase(Phosphotransferase) domain 1	228	420	-	-
	Eupl11g00819	424	Pfam	Ankyrin repeats (3 copies)	22	87	IPR002110	GO:0005515
	Eupl11g00819	424	ProSitePatterns	Protein kinases ATP-binding region signature.	154	175	IPR017441	GO:0005524
	Eupl11g00819	424	SUPERFAMILY	Protein kinase-like (PK-like)	144	419	IPR011009	-
	Eupl11g00819	424	FunFam	serine/threonine-protein kinase STY46-like	141	227	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g00819	Eupl-Chr11	10492569	10503566	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g00819	13	424	MAP Kinase Kinase Kinase	AT1G14000	87.864	0.0	740

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-5	Eupl11g00819		PK_Tyr_Ser-Thr	5.1e-63	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g00819	-		-	egr:104433430	765.377