Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00814 ATGGAGGTGGTTCGTTACTGCACCTGTAGTGGACACCAGAACGGCTCCGGCATTTGTGGTGCGTGCGGCAGCTCTCTGCCGGGTACGAGCAGAACATCGCCGTCTAGTTCGTATTTGCCGGCGATTTCCAGCGGAGATGAAAGAGGATTCGAAGGCCGAGAGAGCTGGTTGTATCACTATATTCCCAGATTAATTGTCTGCGCGCTTTCGGGGGCTCTTACAGGGCTATTTGCTCTTGCTGGAGCTTTCACAGGAGCAGTCACTGGTGCATTAGCAGGTCGTGCTTCTGACAGCGGTGTCCTTCGTGGAGCTGGACTGGGAGCTGTTGCTGGAGCTGTCCTCTCTGTTGAGGTTTTGGAGGCTTCCCGTGCATATTGGTGTTCAGAACGATCTGGCACTAGAAGTTCATCATCCATGGCAGACTTCATAGATGAGTTACTTCATGGGCGGTTTGTACGGGAACAGTTTGCACCTGCAATGCTCAGAGCCTACCATTGGCAGGTGAGCATTGCTGACATAAGTTATGATGAGATATACGATGAGATATATGATGTCTATGGCGAAGTTGTATCAAAAGGTTTGTCGGGGGAGTCATTGAAGAAACTACCATGTCATGTGATCATGGATGAAAACAAATCAGGGTGTGGCTACAGTGTCTGCTGCACGATCTGTTTGCAGGATATTGAAGTAGGAGACACTGTGAGGAGTTTGCCACGGTGCCACCACGTATTTCACTTGACGTGTGTGGACAAGTGGCTTGTGGGACATGGCTCATGCCCTGTGTGCAGACAGAAAGTTTAG 801 0.5031 MEVVRYCTCSGHQNGSGICGACGSSLPGTSRTSPSSSYLPAISSGDERGFEGRESWLYHYIPRLIVCALSGALTGLFALAGAFTGAVTGALAGRASDSGVLRGAGLGAVAGAVLSVEVLEASRAYWCSERSGTRSSSSMADFIDELLHGRFVREQFAPAMLRAYHWQVSIADISYDEIYDEIYDVYGEVVSKGLSGESLKKLPCHVIMDENKSGCGYSVCCTICLQDIEVGDTVRSLPRCHHVFHLTCVDKWLVGHGSCPVCRQKV* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00814 266 ProSiteProfiles Zinc finger RING-type profile. 221 263 IPR001841 -
Eupl11g00814 266 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 56 266 IPR044523 -
Eupl11g00814 266 SMART ring_2 221 262 IPR001841 -
Eupl11g00814 266 Pfam Ring finger domain 221 263 IPR001841 -
Eupl11g00814 266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 266 IPR013083 -
Eupl11g00814 266 SUPERFAMILY RING/U-box 220 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00814 Eupl-Chr11 10438160 10447718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00814 61 266 C3H Transcription Factor Family AT1G74410 61.165 3.84e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00814 - - nnu:104598070 336.265