Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00802 ATGGGCAATTTTGTATGCAAAAGAACGACACCCATCACCAAAGTTGTGATCATAAAGGAGATTGAGAAGAAGAAGGTTGACCTAATTAGCGAATTACCCGACGAGGTTCTAAGTTTGATTATATCGTCGTTGACGTTAAGAGAGGCGGTACAAACTAGTACATTATCAAGAAGATGGAGGTATGTTTGGATGACATCAATCTCCCATCTGAATTTTGATGCTGATGATGTGCTTGGAAGCAATTATATCTCGCGATTTCCATGTTTGGAAGAAAAAACTTCTAAGTTTGTAGGTCTGGTTGATCAAATCCTTGAGCTTCAAATGGGGTCCAAAATAGAAACCTTAAATGTTTGTTTCCAATTAGGTAACAAGTATGCTTGTAATCTTTACCAGTGGATAAGCTTTGCGATCATGGCGGGAGTAGGAACTCTTAGTCTTAAGTTGTCAAAGAAATACAGTGCAGATCATCCAGCTGCCGACGAAACGTATACTTTCCCGTATTGGCTTTTTAATCACGGAAGAAGATATGCCATGAAAAACTTGCATTTGAGTTCTTGCAACTTGAGACCTCCCCCTGATTTCAATGGTTTTGACTCCCTTACTACTCTTAGTTTGGAAGATGTAGATCTAAGCGGAGAAGATGTCGATAATCTCTTGCGCGTTTGTTCGCACCTCGAATCGTTGAGTCTGGTGAAATGCTATCGCATAGCGAATTTAAAAATCGTCGGTCATTCCCTCCAACTCAAGTACTTGAGAGTAGATAGCTTATCCCGGTTAATGGAAATTGAGATTTATGCTGAAAATCTTGTGACATTTGAGTTCATTGGAGATATGGTAATGTTCTCTTTTCGGAATGTTCCTCGATTGATAAATGTAATGCTCAATGTTCTAGACTTCAAAACTGAAGAAGTTACTTTCACCCTCATCAAACTTCCAGGCTATCTCCCTCAACTCGAGACTCTATTCTTATACATTACAAGGCATTTTGTCAAGCTAGCTCACTTGAAATATGAAGAACCAAGGAATATAAGGAGGCCTTCAAAATTCCTCCATAATCACCTCAAATCTGTTGTGATACATGGGTTTTGTGGCGACGAGGGACAAATTGGCATAGCGACGTACATTCTTAATAGTTCTATTGCACTCGAGTCGATGTTAATTGATCTGCGTACGAGATTCTATCTTGGAGATGGAAAATGGAAGGTACATGCTCAACGATACTCGATGAACGCGGGAGAACATCAGAGAATATACGAGCTACTTCAAAGAGAAGCCCCCTCAGGCCTTCAGAGATGTGGGAAGAGCTGTAGACTCAGGTGGACTAACTATCTTAGACCCGATATTAAGAGAGGAAAATTCAGTTTGCAGGAAGAACAAAGCATCATTCAACTCCATGCTCTTCTTGGGAACAGGTGA 1416 0.4032 MGNFVCKRTTPITKVVIIKEIEKKKVDLISELPDEVLSLIISSLTLREAVQTSTLSRRWRYVWMTSISHLNFDADDVLGSNYISRFPCLEEKTSKFVGLVDQILELQMGSKIETLNVCFQLGNKYACNLYQWISFAIMAGVGTLSLKLSKKYSADHPAADETYTFPYWLFNHGRRYAMKNLHLSSCNLRPPPDFNGFDSLTTLSLEDVDLSGEDVDNLLRVCSHLESLSLVKCYRIANLKIVGHSLQLKYLRVDSLSRLMEIEIYAENLVTFEFIGDMVMFSFRNVPRLINVMLNVLDFKTEEVTFTLIKLPGYLPQLETLFLYITRHFVKLAHLKYEEPRNIRRPSKFLHNHLKSVVIHGFCGDEGQIGIATYILNSSIALESMLIDLRTRFYLGDGKWKVHAQRYSMNAGEHQRIYELLQREAPSGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQSIIQLHALLGNR* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00802 471 ProSiteProfiles F-box domain profile. 26 62 IPR001810 GO:0005515
Eupl11g00802 471 CDD F-box_AtFBL13-like 29 64 - -
Eupl11g00802 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 445 471 IPR017930 -
Eupl11g00802 471 SUPERFAMILY Homeodomain-like 430 471 IPR009057 -
Eupl11g00802 471 Gene3D - 383 449 - -
Eupl11g00802 471 Pfam FBD 350 387 IPR006566 -
Eupl11g00802 471 SUPERFAMILY F-box domain 25 67 IPR036047 GO:0005515
Eupl11g00802 471 Gene3D Ribonuclease Inhibitor 168 352 IPR032675 -
Eupl11g00802 471 Gene3D - 16 67 - -
Eupl11g00802 471 PANTHER OS02G0105600 PROTEIN 27 401 - -
Eupl11g00802 471 Pfam F-box domain 29 63 IPR001810 GO:0005515
Eupl11g00802 471 SUPERFAMILY RNI-like 177 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00802 Eupl-Chr11 10251732 10262870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00802 427 471 MYB Transcription Factor Family AT5G15310 91.111 2.46e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00802 - - ming:122075106 342.428