Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00801 ATGGAAGAAGAGATGATGCAGCAACTCAGATTCAAAGCTGCTGAGTTTCTTCTAAGAGAGGAATGGAAGGACTCCATCAATGTCTACTCTCAGTTCATCTCTCTCTGTCAAGAACAGCTCTCAAAGATCCATGAAAAGTCTGCCGCAGATCAAATCCCCAAGCTCCACAAATCCCTTTGTCTAGCCTTCTCGAATCGAGCCGAGGGACGATTCCGACTTAGAGAGTTATCCGATGCTTTGGAGGATTGTGATCTAGCGCTGAAAATAGATTGTACCCATTTCAAGACTCTACTCTGCAAAGGTAAAATATTGCTCAATCTCAATCGGTACTCAATTGCTTCAGATTGCTTCAAACGAGCTCTCCTTGATCTTCAGACCAGTGGGATCCCTGAGATCCTTCTTGGGTATTTAAATAAGTGCAGGAAACTTGAGTTTCAGTCGAGGACTGGGGCTTTCGATCTTTCGGACTGGGTCTTAAATGGGTTTCGAGGAAAATCTCCGGAACTTGCAGAATACATAGGTTCAGTCCAGATTAAGAAATCCGAGTATGGCGGTCGTGGGCTATTTGCTACGAAGAACATCGAATCTGGGACTTTGTTGCTAGTCACCAAAGCAGTTGCCACTGACAGGGGTATCTTGCCGGAACTCGGTGAAGATTTGGATGAGAGTGCTAAATTGGTTATGTGGAAGGACTTCATAGATAAAGTTCTCGACGCTGCAACAAAATGCAGCAGAACTCATAATTTGATATGTATGTTATCAACTGGAGAAGATGAAGAAGACCTCCAAGTTCCTGATATAAGTCTCTTTAGGCCTGAAACTGAGTGCTGCTTTTCCAAGGAGAAGCCTGAAATTGGTAGGATCCTAAGCATATTGGATGTGAATTCTCTAATCGAGGACTCGATTTCAGCCAAAGTCCTTGGAAAGAAGTGTGATAATTATGATTACTATGGTGTTGGGCTATGGATTTTGGCTGGCTTCATCAATCACTCTTGCAATCCTACCGCTAGGCGCTCGCATATTGGAGATCATGTGATAGTTTATGCTTCTAGAGACATCAAGGAAGGGGAAGAGATCACATTCGCCTACTTTGATGTACTTCTGCCATTTAAGAAGCGAAGGGAGATTTCTAAGACATGGGGATTTTATTGTAAATGTAAGAGATGCACGTTTGAGGAGGAGATTAGTCATAGAGAAGGGTTAAGAGAGATCGAGATAGCTCTGGATTATGTGTCAGATATTGGTGGTGTTGTTGTCAGGCTGGAGGAAGAGATGAGAATATGGATGGTGGAGGAGGAGGAGAAGGGGTATTTGAGGGCGTCATTTTGGCCTGCATTTTTGGGAGTTTTCAAGTCGGAGAAGTCAATGAAGAAGTGGGGGAGATGGATTCCGGGAGCTGAGGCTGTCGTGGAGAGCGTGACAGAGGCAGTGGGTGGTGATGAGAGGCTGTTGAAGGTTGTGGTAGAGAGGTTGAAGAGAAATGGTGGGGTGGTGGAGATGGAAAGAGCCATAAAATTGGGGAAAGGTGTGTATGGGAAAGTGGTGAAGAAACAAGCAATGAGAGCTCTCCTTGAGCTTAGCATTCATGACCAAAGCTATTAG 1602 0.4451 MEEEMMQQLRFKAAEFLLREEWKDSINVYSQFISLCQEQLSKIHEKSAADQIPKLHKSLCLAFSNRAEGRFRLRELSDALEDCDLALKIDCTHFKTLLCKGKILLNLNRYSIASDCFKRALLDLQTSGIPEILLGYLNKCRKLEFQSRTGAFDLSDWVLNGFRGKSPELAEYIGSVQIKKSEYGGRGLFATKNIESGTLLLVTKAVATDRGILPELGEDLDESAKLVMWKDFIDKVLDAATKCSRTHNLICMLSTGEDEEDLQVPDISLFRPETECCFSKEKPEIGRILSILDVNSLIEDSISAKVLGKKCDNYDYYGVGLWILAGFINHSCNPTARRSHIGDHVIVYASRDIKEGEEITFAYFDVLLPFKKRREISKTWGFYCKCKRCTFEEEISHREGLREIEIALDYVSDIGGVVVRLEEEMRIWMVEEEEKGYLRASFWPAFLGVFKSEKSMKKWGRWIPGAEAVVESVTEAVGGDERLLKVVVERLKRNGGVVEMERAIKLGKGVYGKVVKKQAMRALLELSIHDQSY* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00801 533 SUPERFAMILY TPR-like 7 122 IPR011990 GO:0005515
Eupl11g00801 533 ProSiteProfiles SET domain profile. 174 364 IPR001214 GO:0005515
Eupl11g00801 533 SUPERFAMILY SET domain 175 387 IPR046341 -
Eupl11g00801 533 Pfam SET domain 185 363 IPR001214 GO:0005515
Eupl11g00801 533 SMART set_7 174 370 IPR001214 GO:0005515
Eupl11g00801 533 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 3 527 - -
Eupl11g00801 533 Gene3D SET domain 274 394 IPR046341 -
Eupl11g00801 533 Gene3D Tetratricopeptide repeat domain 2 142 IPR011990 GO:0005515
Eupl11g00801 533 CDD SET_SMYD 311 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00801 Eupl-Chr11 10233744 10236419 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl11g00801 SET 3.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00801 - - nnu:104597947 722.62