Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00799 ATGGAAGAAGAGATGATGCAGCAACTCAGATTCAAAGCTGCTGAGTTTCTCCTAAGAGAGGAATGGAAGGATTCCATCAATGTCTACTCTCAGTTCATCTCTCTCTGTCAAGAACAGCTCTCAAAGATCCATGAAAAGTCTGACGCAAATCAAATCGCCAACCTCCACAAATCCCTTTGTTTAGCCTTCTCGAATCGAGCTGAGGGACGATTCCGACTTAGAGAGTTCTCCGATGCTTTGGAGGATTGTGATCTAGCGCTGAAAATAGATTGTACCCATTTCAAGACTCTACTCTGCAAAGGTAAAATATTGCTCAATCTCAATCGGTACTCGATTGCTTCAGATTGCTTCAAACGAGCTTTCCTTGATCTTCGGACCAGTGGGAACTCTGAAATCCTTCTTGGGTATTTAAATAAGTGCAGGAAACTTGAGTTTCAGTCGAGGACTGGGGCTTTCGATCTTTCGGACTGGGTCTTAAATGGGTTTCGAGGAAAATCTCCGGAACTTGCAGAATACATAGGTTCAATCCAGATTAAGAAATCTGATTATGGCGGTCGTGGGCTATTTGCGACGAAGAACATCGAATCTGGGACTTTGTTGCTAGTCACCAAAGCAGTTGCCACTGACAGGGGTATATTGCCGGAACTCGGTGAAGATTTGGATGAGAGTGCTAAATTGGTTATGTGGAAGGACTTCATAGATAAAGTTCTCGACGTTGCAACAAAATGGAGCAGAACTCATAATTTGATATGTATGTTATCAACTGGAGAAGATGAAGACGACCTCCAAGTTCCTGATATAAGTCTCTTTAGGCCTGAAACTGAGTGCTGCTTTTCCAAGGAGAAGCCTGAAATTGGTAGGATCCTAAGCATATTGGATGTGAATTCTCTAATCGAGGGTTCGATTTCAGCAAAAGTCCTTGGAAAGAAGTGTGATAATTATGATTACTATGGTGTTGGGCTATGGATTTTGGCTGGCTTCATCAATCACTCTTGCAAGCCTACTGCAAGGCGCTCGCATATTGGAGATCATGTGATAGTTTGTGCCTCTAGAGACATCAAGGAAGGGGAAGAGATCACATTCGCCTACTTTGATGGACTTCTGCCATTTAAGAAGCGAAGGAAGATTTCTAAGACATAG 1140 0.4289 MEEEMMQQLRFKAAEFLLREEWKDSINVYSQFISLCQEQLSKIHEKSDANQIANLHKSLCLAFSNRAEGRFRLREFSDALEDCDLALKIDCTHFKTLLCKGKILLNLNRYSIASDCFKRAFLDLRTSGNSEILLGYLNKCRKLEFQSRTGAFDLSDWVLNGFRGKSPELAEYIGSIQIKKSDYGGRGLFATKNIESGTLLLVTKAVATDRGILPELGEDLDESAKLVMWKDFIDKVLDVATKWSRTHNLICMLSTGEDEDDLQVPDISLFRPETECCFSKEKPEIGRILSILDVNSLIEGSISAKVLGKKCDNYDYYGVGLWILAGFINHSCKPTARRSHIGDHVIVCASRDIKEGEEITFAYFDGLLPFKKRRKISKT* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00799 379 SUPERFAMILY TPR-like 7 121 IPR011990 GO:0005515
Eupl11g00799 379 CDD SET_SMYD 311 375 - -
Eupl11g00799 379 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 3 377 - -
Eupl11g00799 379 Gene3D SET domain 275 379 IPR046341 -
Eupl11g00799 379 SMART set_7 174 370 IPR001214 GO:0005515
Eupl11g00799 379 ProSiteProfiles SET domain profile. 174 364 IPR001214 GO:0005515
Eupl11g00799 379 Gene3D Tetratricopeptide repeat domain 2 148 IPR011990 GO:0005515
Eupl11g00799 379 SUPERFAMILY SET domain 175 367 IPR046341 -
Eupl11g00799 379 Pfam SET domain 185 363 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00799 Eupl-Chr11 10199122 10200309 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl11g00799 SET 3.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00799 - - nnu:104597947 521.161