Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00797 ATGGAAAACGTCTCTGGACTTAGTAAGGGAGATTATCAGAATCAGATGGATTTGCCTCCGGGTTTTCGGTTCCACCCAACTGATGAAGAGCTTATAACTCACTACCTTTACAAGAAGGTCCTTAACAGCAGTTTTTATGCTCGAGCAATTGGTGAGGTGGATTTGAATAAGTGTGAGCCTTGGGATTTGCCAATGAGAGCAAAAATGGGGGAGAAGCAGTGGTATTTCTTCTGTGTAAGAGACAGAAAATATCCAACTGGTTTAAGGACAAACAGGGCTACTGAAGCCGGGTACTGGAAAGCCACAGGGAAAGATAAGGAAATTTACAGAGGAAAATCACTAGTTGGCATGAAGAAAACTCTAGTTTTCTACAAAGGGAGAGCTCCGAAAGGAGAAAAAACCAACTGGGTTATGCATGAGTACAGATTAGAGGGGAAATACTCTCTCTATAACCATCCCAAAACAGCCAAGAACGAATGGGTGATTTCCAGGATATTTCAGAAGAGTTCAGGTGAGAAGAAAACTTATGTTTCAGGGATGGTGAGATTGAGCTCCTTGGGAGATGAATTGGGTCCATCTCTTCTGCCTCCATTAATGGATTCTTTGCATTATAGTGGGAAGACTAGAACTACTGTAGCTGAGAGAGCTCACGTGACCTGCTTCTCCAACACAATGGAGGGACAGAAAAACAGGGAAGAGATTATAGATTGTTTAAATTCTTCTCTTTTCTCTGCTTCTGCAAATCCCTCTGACATCTTGCCGCCTTCATTGATTTTCTCCAAAGTTTCTCTTCCAAACTCATTCTACTTCAATCAAGCTCCTCCAAATCTAGCCAATTTACAATACTCAGGTTCTGTTTTAACGCAAGATCAGGCCATTTTGAGGGCTTTACTAGAAAATCATGGATCAACTATGAAACAGAATTGCAAAGCAGAGAAGGAGATGGGTAGTATCTCACAAGAAACAAGCCTAACTACTGATATGAACACCGAAATCTCTTCAGTTATATTGAATCATGAAATGAGTAGGCGGTCTTTCGAAGGTCAAGAGGACCCATCTACTTCAGCTGGACCTGTAGACCTTGATTGCCTTTGGAACTACTGA 1104 0.4167 MENVSGLSKGDYQNQMDLPPGFRFHPTDEELITHYLYKKVLNSSFYARAIGEVDLNKCEPWDLPMRAKMGEKQWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKYSLYNHPKTAKNEWVISRIFQKSSGEKKTYVSGMVRLSSLGDELGPSLLPPLMDSLHYSGKTRTTVAERAHVTCFSNTMEGQKNREEIIDCLNSSLFSASANPSDILPPSLIFSKVSLPNSFYFNQAPPNLANLQYSGSVLTQDQAILRALLENHGSTMKQNCKAEKEMGSISQETSLTTDMNTEISSVILNHEMSRRSFEGQEDPSTSAGPVDLDCLWNY* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00797 367 FunFam NAC domain-containing protein 100-like 27 172 - -
Eupl11g00797 367 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Eupl11g00797 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 290 - -
Eupl11g00797 367 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
Eupl11g00797 367 Gene3D NAC domain 27 172 IPR036093 GO:0003677|GO:0006355
Eupl11g00797 367 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00797 Eupl-Chr11 10195245 10197431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00797 16 367 NAC Transcription Factor Family AT5G07680 58.357 1.21e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl11g00797 NAM 2.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00797 - - msin:131231028 582.022