Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00786 ATGGGTCTTCTGGGGTTTCTCCTGGTGGGTTTTCTCTCTATGGTCTCATCTGTTTTTGGGTATGGTCGTGGAGGGTGGATTAATGCTCGTGCCACCTTCTATGGAGGGAGTGATGCCTCTGGCACAATGGGTGGGGCATGTGGTTATGGAAACCTCTACAGCCAGGGTTATGGGACTAATACTGCAGCTTTGAGCACAGCCCTGTTCGACAATGGATTGAGCTGTGGGTCTTGCTATGAGATCAGGTGTGTGAATGATCCACAGTGGTGCCTTCCTGGCTCCATTGTGGTTACAGCCACCAACTTTTGCCCACCAGGGGGTTGGTGTGACCCTCCTCAGCAACACTTTGATCTCTCTCAGCCTATCTTCCAGCACATTGCTCAATACAGAGCAGGGGTTGTACCTGTGGCTTACAGAAGGGTACCCTGCAGAAAGACGGGAGGGATCAGGTTCACCATCAATGGCCATTCCTACTTCAACCTTGTTCTGATAACCAATGTGGGAGGTGCTGGTGATGTGCATGCTGTTTCCATCAAAGGTTCAAGGACTAGTTGGCAACCAATGTCAAGAAACTGGGGGCAAAACTGGCAGAGCAACAGCTACCTCAATGGACAAAGCCTCTCTTTCAAGGTTACCACGAGTAATGGGCATAGTGTAGTCTCTTACAATGTTGCCCCTGCTAGCTGGTCCTTTGGCCAGACATATAGTGGAGGGCAGTTCTTTAGTGGAAGGAAGTTCCCCTAG 744 0.504 MGLLGFLLVGFLSMVSSVFGYGRGGWINARATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLSCGSCYEIRCVNDPQWCLPGSIVVTATNFCPPGGWCDPPQQHFDLSQPIFQHIAQYRAGVVPVAYRRVPCRKTGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTSWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSNGHSVVSYNVAPASWSFGQTYSGGQFFSGRKFP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00786 247 PRINTS Expansin signature 123 136 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 194 215 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 223 239 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 147 159 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 159 180 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 106 123 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Eupl11g00786 247 SUPERFAMILY Barwin-like endoglucanases 25 166 IPR036908 -
Eupl11g00786 247 Gene3D - 148 241 IPR036749 -
Eupl11g00786 247 PANTHER EXPANSIN-A15 13 240 IPR002963 GO:0009664
Eupl11g00786 247 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Eupl11g00786 247 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Eupl11g00786 247 PRINTS Expansin/Lol pI family signature 223 237 IPR007118 GO:0005576
Eupl11g00786 247 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Eupl11g00786 247 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Eupl11g00786 247 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576
Eupl11g00786 247 FunFam Expansin 148 240 - -
Eupl11g00786 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 148 IPR007112 -
Eupl11g00786 247 Pfam Expansin C-terminal domain 149 226 IPR007117 -
Eupl11g00786 247 SUPERFAMILY PHL pollen allergen 145 236 IPR036749 -
Eupl11g00786 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 237 IPR007117 -
Eupl11g00786 247 CDD DPBB_EXPA_N 25 143 - -
Eupl11g00786 247 Gene3D - 14 144 IPR036908 -
Eupl11g00786 247 SMART dpbb_1 61 138 IPR007112 -
Eupl11g00786 247 FunFam Expansin 15 144 - -
Eupl11g00786 247 Pfam Lytic transglycolase 61 138 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00786 Eupl-Chr11 10086788 10088589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00786 1 240 Expansin Gene Family AT2G03090 76.210 2.27e-139 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00786 - K20628 vvi:100244103 461.07