Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00782 ATGACCATGCAACAGTTCAACAGCACCATCTGTCACCATGAAAATGAAGGTATGACCAAAAAATATAATATTTATGCATCAGAGAACTCCCACGCCCTCAACAGTTACTCTTCCACCTCTTCTTCTTCTTCAATGGGGTTGTTTGCAGATATTGGTTCTCTCTCCATTAATCCCAACTATGGAGTAGTTTCAACTGGGTCTTCTTCACAAGAGAGTTATTACTGTAAGAGCTCAGAGAAGGATAGTAGGAGAGCTTGCTGGACTTTTCCTTTTATGGGAACTAGCAGCTTAGAGGATTGCAGTGATGGGTTCGAAGAAAACAATGCTGCCATGGAAGACAACAACAACAACAACAACAACAACAACAACAATGGCTATTTAAATGAAGAGAACCCAAATGAGAATTCAGTGAATGGGAAGGAAATAGATAGTGGGCAGTCAAAGCTTTGTGCTAGAGGGCATTGGAGGCCTGCAGAGGACACCAAGCTCAAGGAACTTGTAGCTCTTTATGGTCCTCAGAACTGGAACCTTATAGCAGAGAAATTGGAAGGAAGATCAGGAAAGAGTTGTAGACTGAGATGGTTTAATCAGTTGGACCCAAGGATCAATAGAAGATCTTTCAGTGAAGAAGAAGAGGAGAGGCTAATGGCTGCTCATAGACTGTATGGTAACAAATGGGCCATGATTGCTAGGCTTTTCCCGGGAAGGACCGATAATGCAGTCAAGAACCACTGGCATGTAATCATGGCTAGGAAATACAGAGAGCAGTCTAGTGCTTATAGGAGGAGGAAGTTGAGCCAAGCTGTTCATAGAAGGCTGGAGGAGGGTGCAAGCTTTGTCTGCAGAGATACAACCACAATAGCAGAACCCAACTGTCTATGCAATAGCAACTTCAGCAACCCATCTCCCTACTTATTTGCAGCTCTCATGGGTGGTGGTGGATCCAATGGCTTACCCCATATGATCAGTGGTGAAGATTCAGTTTCAAATTGTAAAGATTTGTTGCTTGGTTCTTCAACCAGCAATGAACTTCTTCCGCACAGTGGGTTTTGTGCTGAGCAGACACATCTTGATTTCTTTTCTGGTCCCAAGAACCATGAAATGACAAGTTTTTCCAACCAGGGCAGTTTCTGGGATAGGCCAAGAGATGATTCCACCTTCAGTGGTTTCTATCCCCACTACCCTCCGTTGATGATGGCAATGCAACAGTCAAACCACCATCACCCTCCTTATTACTCAGAGTCCACAACATCAACATCCCAAGTCTCAGTCACTGAAGCATCATCGTCAGATGCAGAGAAAAGAGGGGCCAGCCATTTTGAGGCCACGATATCACCACCATTCATAGACTTTCTTGGGGTAGGAGCGACATGA 1374 0.4432 MTMQQFNSTICHHENEGMTKKYNIYASENSHALNSYSSTSSSSSMGLFADIGSLSINPNYGVVSTGSSSQESYYCKSSEKDSRRACWTFPFMGTSSLEDCSDGFEENNAAMEDNNNNNNNNNNNGYLNEENPNENSVNGKEIDSGQSKLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRSFSEEEEERLMAAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQAVHRRLEEGASFVCRDTTTIAEPNCLCNSNFSNPSPYLFAALMGGGGSNGLPHMISGEDSVSNCKDLLLGSSTSNELLPHSGFCAEQTHLDFFSGPKNHEMTSFSNQGSFWDRPRDDSTFSGFYPHYPPLMMAMQQSNHHHPPYYSESTTSTSQVSVTEASSSDAEKRGASHFEATISPPFIDFLGVGAT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00782 457 FunFam MYB transcription factor 152 203 - -
Eupl11g00782 457 CDD SANT 155 196 IPR001005 -
Eupl11g00782 457 MobiDBLite consensus disorder prediction 405 439 - -
Eupl11g00782 457 SMART sant 203 251 IPR001005 -
Eupl11g00782 457 SMART sant 151 200 IPR001005 -
Eupl11g00782 457 CDD SANT 215 246 IPR001005 -
Eupl11g00782 457 Gene3D - 206 274 - -
Eupl11g00782 457 MobiDBLite consensus disorder prediction 406 431 - -
Eupl11g00782 457 MobiDBLite consensus disorder prediction 108 143 - -
Eupl11g00782 457 ProSiteProfiles Myb-like domain profile. 199 249 IPR001005 -
Eupl11g00782 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 253 IPR017930 -
Eupl11g00782 457 Gene3D - 152 203 - -
Eupl11g00782 457 ProSiteProfiles Myb-like domain profile. 152 198 IPR001005 -
Eupl11g00782 457 FunFam MYB transcription factor 205 275 - -
Eupl11g00782 457 Pfam Myb-like DNA-binding domain 204 247 IPR001005 -
Eupl11g00782 457 Pfam Myb-like DNA-binding domain 152 198 IPR001005 -
Eupl11g00782 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 198 IPR017930 -
Eupl11g00782 457 MobiDBLite consensus disorder prediction 106 143 - -
Eupl11g00782 457 SUPERFAMILY Homeodomain-like 152 245 IPR009057 -
Eupl11g00782 457 PANTHER MYB PROTEIN-RELATED 130 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00782 Eupl-Chr11 10036238 10038659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00782 150 264 MYB Transcription Factor Family AT1G69560 91.304 2.41e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl11g00782 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00782 K09422 - nnu:104597747 567