Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00776 ATGAGTCTGCAGAGAATGCAAAACCAAGACATGGGTTCAGTCCTGTCCACTGATTCAAAGCCCAGGCTGAAGTGGACTCCAGAGCTTCACCGACGATTTGTCCAAGCAGTTACTCAGCTTGGAGGGGCAGACGAAGCAACACCAAAGAGTCTGATGAGCGTGATGAATATTCCTGGACTGACTTTGTACCACCTAAAGAGCCATTTACAGAAATATAGGCTTGGAAAGAACCAACAATCAGAAATCTGCAGTGACAATAAACATGAAGATTTCACAGAGGCAGATTACCAAGAGAATGAGATTAGAAATGGCCATATCAGTGGGGAAATCATGGGTAAAACCCACACACAGATTAATGAAAGCTTGCAGATAGCCCAGGCTTTACAGATGCAAATGGAAGTGCAGAAGAAACTCCATGAACAGATTGAGGTGCAGAGACATTTGCAGCTGCGAATTGAAGCTCAAGGGAAGTATTTACAGTCGGTGCTAAAGAAAGCACAGGAAACTCTTGCTGGGTATAATTCTTCTTCTATGGGACTTGAAGCTGCAAAAGCTGAATTCTCTGAATTGGTCTCCATGGTCGACCCCCAGTGCTTGAGTTCTTCATTCTCAGGATTAACAGAAACAGGAGGCTTAAGTTTAGAAGTAGGAAAGAGATCCGTAAGGGGTACAGCTTGCTCCATGGATAGCTCATTAACATCCTCTGAAAGCTCAGGAAGAAAGGATGAGAAGAAAAAAAAGCTAGAGAGGGGAGATACCCATGAGTGTAACAGGACTACTCTACTTCCATTAACGAAAATCGATCGAAATGAAAGCAGCCTGTGCAATTCCGGTTCAAGTGATCATGTTAGAGGGAGGAAGAGAAGTGGGAGCACCATTTCAGATGAGACTAATTGTGTTGATCAGACATCAACCAAGAGAACACCACCCCATGAAGAGAAACTTGTAAACCAGTTGAGAAAGTCCAGATCATTGGAGGAACTTGATTTGAACCGCGAGTATCAGAGCGAGATGGATTTGGGTGATGGGGAACTAGACTTGAACTGTAGAAGACCTGAACCATTCAATGAGTCTTCAAAGCATTTTGGTGCCTGA 1095 0.4384 MSLQRMQNQDMGSVLSTDSKPRLKWTPELHRRFVQAVTQLGGADEATPKSLMSVMNIPGLTLYHLKSHLQKYRLGKNQQSEICSDNKHEDFTEADYQENEIRNGHISGEIMGKTHTQINESLQIAQALQMQMEVQKKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYNSSSMGLEAAKAEFSELVSMVDPQCLSSSFSGLTETGGLSLEVGKRSVRGTACSMDSSLTSSESSGRKDEKKKKLERGDTHECNRTTLLPLTKIDRNESSLCNSGSSDHVRGRKRSGSTISDETNCVDQTSTKRTPPHEEKLVNQLRKSRSLEELDLNREYQSEMDLGDGELDLNCRRPEPFNESSKHFGA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00776 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 281 IPR044848 GO:0003700
Eupl11g00776 364 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Eupl11g00776 364 Coils Coil 125 145 - -
Eupl11g00776 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Eupl11g00776 364 Gene3D - 19 78 - -
Eupl11g00776 364 MobiDBLite consensus disorder prediction 236 256 - -
Eupl11g00776 364 FunFam Myb family transcription factor 19 77 - -
Eupl11g00776 364 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Eupl11g00776 364 MobiDBLite consensus disorder prediction 270 364 - -
Eupl11g00776 364 MobiDBLite consensus disorder prediction 306 357 - -
Eupl11g00776 364 MobiDBLite consensus disorder prediction 225 257 - -
Eupl11g00776 364 Pfam MYB-CC type transfactor, LHEQLE motif 122 169 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00776 Eupl-Chr11 9960060 9962072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00776 11 308 G2-like Transcription Factor Family AT1G69580 50.968 2.17e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl11g00776 Myb_DNA-binding 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00776 - - nnu:104597653 458.759