Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00774 ATGGCAGCCGAATCAGACGCCGAAACTTCGTTTCTGGAGCAACTCATAAGTTCCAGAAACAGAGATCTAACTTTACTTCTCCCTCTCATCTTGGGTTTCTCGAGTTCCCCAAGAAGAGAAACCTACGATTCAGATGAAGAAACAGGTGGGTCCCATGAGCGGATCATCCTTATCAATCCCTTCACTCAAGGGATGATTGTCATAGAAGGTAGTCGAAGCTTGGATGCCCTGCTTCGCGAGATATCGAACAAGGAAGGGCCTCCACCGGCGTCGAAGGCATCGATTGAAGCGATGCCGAAAGTGGAGATCACAGAGGCGGAGGAGGAAGGAGATGGGGAGTGTGCGATTTGCTTAGAGGGGTGGGAGATTGGTGGGGAAGCGAGGGAGATGCCTTGTAAGCACAGGTACCACTCGAATTGTATAGAGAAGTGGTTGGGGATTCATGGGTCTTGCCCTGTTTGTAGGTTTAAGATGCCTGTAGATGAAGAGGAGTGCAAGAAGGGAAGTAGTGGTGGTGACGAAGAAGAAGAGAGAGGGAGAAGGGTTGGGAGGGAGATTTGGGTTAGGTTTTCTTTTAGCAGCAATAGGAGAGATTCAACAACTTCAAGTGATTCTGATTCTTCTTCAACTCCAAGACCTGATGATGATGATGAAGACGATAGTCATGATGTTGTTGATGATGGATCATCGAGCATTCAAGAGAACTGA 708 0.4788 MAAESDAETSFLEQLISSRNRDLTLLLPLILGFSSSPRRETYDSDEETGGSHERIILINPFTQGMIVIEGSRSLDALLREISNKEGPPPASKASIEAMPKVEITEAEEEGDGECAICLEGWEIGGEAREMPCKHRYHSNCIEKWLGIHGSCPVCRFKMPVDEEECKKGSSGGDEEEERGRRVGREIWVRFSFSSNRRDSTTSSDSDSSSTPRPDDDDEDDSHDVVDDGSSSIQEN* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00774 235 MobiDBLite consensus disorder prediction 162 235 - -
Eupl11g00774 235 SUPERFAMILY RING/U-box 95 161 - -
Eupl11g00774 235 ProSiteProfiles Zinc finger RING-type profile. 114 155 IPR001841 -
Eupl11g00774 235 MobiDBLite consensus disorder prediction 192 208 - -
Eupl11g00774 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 161 IPR013083 -
Eupl11g00774 235 Pfam Ring finger domain 113 155 IPR001841 -
Eupl11g00774 235 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 39 159 - -
Eupl11g00774 235 SMART ring_2 114 154 IPR001841 -
Eupl11g00774 235 MobiDBLite consensus disorder prediction 162 185 - -
Eupl11g00774 235 FunFam E3 ubiquitin-protein ligase RNF181 78 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00774 Eupl-Chr11 9945886 9947025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00774 1 197 C3H Transcription Factor Family AT1G26800 52.970 5.81e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00774 - - nnu:104598113 266.159