Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00756 ATGGATTTAATCACCACCACCACCACCACCACAAGAACTCCAGAAACAGAAACCGAAACACAACACACCAAACCCACCGACCACAACCATCCTAAAGCCTTATCCTTCACCAATGGCACACTCAAGCGCCACCACCACCCAACAATCCGAGCTGTGGTGGTTTACAAGGAATGTCTTAAGAACCACGCGGCTAGCTTAGGAGGGCACGCTTTAGATGGGTGCGGAGAGTTTATGCCGTCACCCACCGCCACGCCAACTGATCCCACCTCGCTGAAATGCGCGGCCTGCGGATGCCACCGTAACTTCCATCGGCGTGACCCGGAAGATGTTACCCACGTTGTTGAATACCACCACCACCATCGGCACCAACTACCACCACCTCGCGTCCGAAGCCCAAATTCATCTTCTCCCCCACCAATTTCGTCATCTTACTTCCCTTCTGCTCCTCATATGTTGCTCGCTTTGAGCGCCGGCTTATCGGGTCCGTCCGATAATCATCCGACGGAGAATATTACTACGATGATGACGACAACAACGACAACCCCGATGGCAGGAAACCCAAATGGGGGGAGGAAGCGGTTTAGGACGAAATTCAGTCAGGAGCAGAAGGAGAAAATGTACTCTTTTTCTGAGAAATTGGGGTGGAAGATGCAGAAGAGTGATGAAGGATTAGTGGAGGAGTTCTGCAATGAGATTGGGGTGGGGAAAGGTGTGTTGAAGGTTTGGATGCACAACAACAAGCACACTTTGGGTAAGAGAGATGGTAATGGTAGTAGTAACAACCTTCACACCACCATCAACCACAATGATGGTAGTATTGCTCATGTCACTGCTCATTGTTCTTCTTCTTCTTCTTGA 858 0.5023 MDLITTTTTTTRTPETETETQHTKPTDHNHPKALSFTNGTLKRHHHPTIRAVVVYKECLKNHAASLGGHALDGCGEFMPSPTATPTDPTSLKCAACGCHRNFHRRDPEDVTHVVEYHHHHRHQLPPPRVRSPNSSSPPPISSSYFPSAPHMLLALSAGLSGPSDNHPTENITTMMTTTTTTPMAGNPNGGRKRFRTKFSQEQKEKMYSFSEKLGWKMQKSDEGLVEEFCNEIGVGKGVLKVWMHNNKHTLGKRDGNGSSNNLHTTINHNDGSIAHVTAHCSSSSS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00756 285 Pfam ZF-HD protein dimerisation region 53 107 IPR006456 -
Eupl11g00756 285 SUPERFAMILY Homeodomain-like 182 252 IPR009057 -
Eupl11g00756 285 Gene3D - 177 252 - -
Eupl11g00756 285 MobiDBLite consensus disorder prediction 1 32 - -
Eupl11g00756 285 MobiDBLite consensus disorder prediction 156 193 - -
Eupl11g00756 285 NCBIfam homeobox domain, ZF-HD class 191 247 IPR006455 -
Eupl11g00756 285 FunFam Zinc-finger homeodomain protein 2 178 252 - -
Eupl11g00756 285 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 26 250 - -
Eupl11g00756 285 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 55 106 IPR006456 -
Eupl11g00756 285 MobiDBLite consensus disorder prediction 115 143 - -
Eupl11g00756 285 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 55 106 IPR006456 -
Eupl11g00756 285 MobiDBLite consensus disorder prediction 1 16 - -
Eupl11g00756 285 MobiDBLite consensus disorder prediction 161 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00756 Eupl-Chr11 9754556 9756608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00756 1 260 ZF-HD Transcription Factor Family AT5G15210 48.921 3.64e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Eupl11g00756 ZF-HD_dimer 2.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00756 - - nnu:104598131 334.339