Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00754 ATGGGTAGACCACCTTGCTGTGATAAAATAGGTCTGAAGAAAGGGCCTTGGACTCCAGAGGAAGATATAATCTTAGTCTCTTATATTCAAGAACATGGTCCAGGGAATTGGAGGGCTATTCCTACTAATACTGGGTTGCTTAGATGCAGTAAGAGTTGCAGGCTTAGATGGACTAATTACCTTAGGCCGGGGATCAAACGTGGTAACTTTACTGATCATGAAGAGACTATGATAATCCATCTTCAAGCTCTTTTGGGCAATAGATGGGCTGCTATAGCTTCTTACCTCCCTCAGAGAACAGACAACGATATCAAGAACCACTGGAATACCCATCTGAAAAAGAAGCTGAAGAAGCTTCAAACAGGCGTTGATGGCCGTACCACAGACGGGTCATCGGGTTTACAGTCAATCACGAAAGGTCAGTGGGAGAGGAGGCTTCAAACTGACATACACATGGCTAAGAAAGCTCTATTCGAGGTCTTGTCTCTCGAAAAACCTAGCTATTTTTCTGAGTTGAACACCTCCATTAATGGCTATAGCTCTTACATGAGACCAAGCCAACCGACTACCTATGCATCGAGCACGGAGAACATTTCCAAGTTGCTCGAAGGATGGACGAGGAATTCACCAAAACCTGCTCAAACTCAAACAACCTCAGAGACTACTACTCAACATTCCTTCAATAACACAACTGGGACGACTGACTCCATTTCTAGTGAAGGGACACCAAGTGCAGCAAATAACTCCTTTGAATCACTGTTAGGTTTCGATTCTTCCACCCCTGAAACTAGCCTCTTCCAAGACGAAAGCAAGCCAAATTTTGAGACCCAAGTTCCTCTCTCCTTGCTTGAGAAATGGCTGTTTGATGAAGGTCTTGTTCAAGGGAAAGAAGACTTCATTGAGACCTCACTATATGAAACTTCTGAGTTGTTTTAA 936 0.437 MGRPPCCDKIGLKKGPWTPEEDIILVSYIQEHGPGNWRAIPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDHEETMIIHLQALLGNRWAAIASYLPQRTDNDIKNHWNTHLKKKLKKLQTGVDGRTTDGSSGLQSITKGQWERRLQTDIHMAKKALFEVLSLEKPSYFSELNTSINGYSSYMRPSQPTTYASSTENISKLLEGWTRNSPKPAQTQTTSETTTQHSFNNTTGTTDSISSEGTPSAANNSFESLLGFDSSTPETSLFQDESKPNFETQVPLSLLEKWLFDEGLVQGKEDFIETSLYETSELF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00754 311 CDD SANT 16 61 IPR001005 -
Eupl11g00754 311 Gene3D - 68 129 - -
Eupl11g00754 311 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Eupl11g00754 311 Gene3D - 13 66 - -
Eupl11g00754 311 FunFam MYB-related transcription factor 13 66 - -
Eupl11g00754 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Eupl11g00754 311 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Eupl11g00754 311 SMART sant 13 63 IPR001005 -
Eupl11g00754 311 SMART sant 66 114 IPR001005 -
Eupl11g00754 311 CDD SANT 69 111 IPR001005 -
Eupl11g00754 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 231 - -
Eupl11g00754 311 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Eupl11g00754 311 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl11g00754 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Eupl11g00754 311 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl11g00754 311 MobiDBLite consensus disorder prediction 204 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00754 Eupl-Chr11 9718813 9720394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00754 1 290 MYB Transcription Factor Family AT5G62470 52.199 1.65e-107 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl11g00754 Myb_DNA-binding 4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00754 K09422 - nnu:104598133 444.506