Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00750 ATGGATGAGAAGCATGATTTTGATAAGGTGGATGAAATAATGCTGCCTGGGTTCCGATTTCATCCAACTGATGAAGAGCTTGTTGGGTTCTATTTGAAGAGGAAGATTCAGCAGAAGACACTTTCTATCGAGCTTATCAAGCAACTGGACATTTATAAATATGATCCACGGGATCTTCCAAAACTGGCGACAACAGGGGAGAAAGAGTGGTATTTCTACTGCCCAAGGGACAGAAAATATAGGAACAGTGCTAGGCCTAACCGAGTCACTGGAGCTGGGTTTTGGAAAGCAACAGGAACGGACCGGCCCATCTACTCATCTGAAGGTGCCAAGTGCATTGGCTTGAAGAAATCCCTCGTGTTCTACCAAGGCAGAGCAGCCAAAGGGATCAAAACTGACTGGATGATGCATGAGTTTAGGCTACCTTCTCTCACTGACCCAGGCCTACCAAAGAGGCCCATGGATAAAAACATTCCTGTCAATGATTCATGGGCTATTTGCAGGATCTTTAAGAAAACCAACTCTATGGCACAGAGAGCACTTTCTCACTCTTGGGTCTCTCTCATACCTGAAACCAATGGATCGTCAGACATAGTTACTCATGGTACACACTGTACTCAGTTCAGTTCAGAGAACATCTCTTGCATAACTGAAGCCGGATCATCCATCCAGTTTTGCAATTCTACCACTAGTTTCTCACCTGTAGATGTCCCCTCCTCCTACAAACCTGTTAATGCAATGGTCTATAAGCCATCTCTACTTCCCATTCCGAATGGAGACCTTCCTACTGGTTTCATGTTCTCGTCTGTCGACATGTCAGGACCTCCTAAATGTAGAGCCGACGTTGCTTCCATGCTCGTAAACCTGTCTCCTCCCTTACTCGAGGACATCGGTGGGTCGACGCAACAAGAGTGCAGCGGTTTCTCTCTGACTTTACAGCAAGAGATGGAAGGGAACATGGGTATGGGAGAAGATCAAGAAGCATGGTTGAGGAAGAACCCAAACACACCCCACGTTAATAACCAGTGGGGAACCGTTGAATCAGTTGGGTTTCCCTTCAGTCTGCCTACGACCCTGCCTGATGCATGGAAGCCCAATTGGCCATGGGATTCTCCCCCCTGTCCTAGTGAGATGTCTACAAGTTATTCAACGAACAAGAACTATACTTGA 1170 0.4658 MDEKHDFDKVDEIMLPGFRFHPTDEELVGFYLKRKIQQKTLSIELIKQLDIYKYDPRDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGAKCIGLKKSLVFYQGRAAKGIKTDWMMHEFRLPSLTDPGLPKRPMDKNIPVNDSWAICRIFKKTNSMAQRALSHSWVSLIPETNGSSDIVTHGTHCTQFSSENISCITEAGSSIQFCNSTTSFSPVDVPSSYKPVNAMVYKPSLLPIPNGDLPTGFMFSSVDMSGPPKCRADVASMLVNLSPPLLEDIGGSTQQECSGFSLTLQQEMEGNMGMGEDQEAWLRKNPNTPHVNNQWGTVESVGFPFSLPTTLPDAWKPNWPWDSPPCPSEMSTSYSTNKNYT* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00750 389 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Eupl11g00750 389 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Eupl11g00750 389 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Eupl11g00750 389 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 217 - -
Eupl11g00750 389 FunFam NAC domain-containing protein 35 23 175 - -
Eupl11g00750 389 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00750 Eupl-Chr11 9684359 9686113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00750 2 251 NAC Transcription Factor Family AT1G26870 61.049 6.49e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl11g00750 NAM 2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00750 - - ming:122062489 574.704