Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00729 ATGTCGTGTCGAAGCTTATATATCATGGCTTCTCCGGTTTCGTCAAGCGAGCAAACACCGCGGACGGAGGTATCCATTATAAACCAAGCTTCCTTGGAGGAAAACTGTGAGAATTTACACTCAGATGGCTTTGCGAAAGAGAAAATCTGGAACATTAAAATGTCCCTTAAAAACCAAGCTTTCTTGGAGGGAAACTGTGGAAGTTCACATTCAGAAGATGCTCAATTAAAACCTCTTTCTGGCTTGGAAAATGGACAAACTCCGAAGCATGAGATATCCATTGAAAGCAAAACGTTGTTGGAGGAAAATTGCAAGACGTCACCTTCATACAATCCTCAGCTAATGCCTCTTTCTCTCTTGGGGAATGAGCAAATCCCAGAGAGTGCGACACCGCTTAGAAACCAATCTTTGTCTGAGGAGAATCAGGATTCAGGGAATTTTCAGGCTGTACTTGTTTCAGATTCGGTTCAGTGTCCACAATTGGACAAAGTTGAAGGCAGTGATTGCATTGAAAAGAACGCAAAGGAGGATACTTATCTTCTTGGATCTGCTCCAAAGAAGTCAATCATGAAAGATGACCAGCGAACATCAAAATATCACGGAGTTAGTAGACATTTTTGGACTGGGAAATTTGAAGCACACCTTTGGGATAACAGTTTCATAAGAGAAGGCCATAGACGTAAAGGAAAACAAGTATTTCTAGGCCAATACGAGGTCGAGGAGAAAGCTGCACAAGCATACGACCTTACAGCTCTCAAATACTGGGGTCCAAGTGCAAGTACCAAATTGAACTTCCCTATCTCTAGCTACGAGAAAGTACTTGAGGAGATGAACAATATGTCTCGAGAGGAGTTTGTCACATCTATTAGAAGGAAAAGTTGTTTTAAGAGAGGTTCTTCCATTTACAGAGGAGTGACAAGACATGGGGATGGGCGATGGCAAGCTCGAATAAGCGGGGTTCCTGGCAAGAGGGGCCTGCACCTCGGAACATTTATTGAGCTCAGAGGAAGAAGCTGCGAAGGCGTACGATATTGCTGCTGTGAAACTTCGAGGCATGAAGGCCTTTACAAACTTTGA 1077 0.4336 MSCRSLYIMASPVSSSEQTPRTEVSIINQASLEENCENLHSDGFAKEKIWNIKMSLKNQAFLEGNCGSSHSEDAQLKPLSGLENGQTPKHEISIESKTLLEENCKTSPSYNPQLMPLSLLGNEQIPESATPLRNQSLSEENQDSGNFQAVLVSDSVQCPQLDKVEGSDCIEKNAKEDTYLLGSAPKKSIMKDDQRTSKYHGVSRHFWTGKFEAHLWDNSFIREGHRRKGKQVFLGQYEVEEKAAQAYDLTALKYWGPSASTKLNFPISSYEKVLEEMNNMSREEFVTSIRRKSCFKRGSSIYRGVTRHGDGRWQARISGVPGKRGLHLGTFIELRGRSCEGVRYCCCETSRHEGLYKL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00729 358 SMART rav1_2 198 272 IPR001471 GO:0003700|GO:0006355
Eupl11g00729 358 ProSiteProfiles AP2/ERF domain profile. 198 266 IPR001471 GO:0003700|GO:0006355
Eupl11g00729 358 SUPERFAMILY DNA-binding domain 300 331 IPR016177 GO:0003677
Eupl11g00729 358 CDD AP2 197 268 IPR001471 GO:0003700|GO:0006355
Eupl11g00729 358 Gene3D AP2/ERF domain 197 268 IPR036955 GO:0003700|GO:0006355
Eupl11g00729 358 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 143 331 - -
Eupl11g00729 358 SUPERFAMILY DNA-binding domain 197 267 IPR016177 GO:0003677
Eupl11g00729 358 Pfam AP2 domain 197 256 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00729 Eupl-Chr11 9364063 9370064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00729 61 331 AP2-EREBP Transcription Factor Family AT1G51190 44.322 9.65e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl11g00729 AP2 5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00729 K09285 - psom:113297994 297.745