Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00724 ATGTCTAGCAGAAGATCAAGAGCTTCAACAATTACAGAAGATGAGATTAATGATCTGATCTTCAAACTACAAGCGCTAATACCAGCGATTCGTCGTAGGAGCTCAACCAGGGCATCGGTGTCAAAGATTTTGAAAGTGACATGCAGTTACATCCGGAGCCTACACAGAGAGGTGGACGATCTGAGTGACAGACTATCTGATCTAATGACTTCTTTGGACCCCAGTAGTGTTGAGGCAGAGATCCTCACAAGTCTCTCTCTCTCTCATTTTCTTTCTGAGTTGGTCGCGAGTCACACCGCCAACCATATAGAGAGATGGATCGGTTAA 327 0.4495 MSSRRSRASTITEDEINDLIFKLQALIPAIRRRSSTRASVSKILKVTCSYIRSLHREVDDLSDRLSDLMTSLDPSSVEAEILTSLSLSHFLSELVASHTANHIERWIG* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00724 108 PANTHER TRANSCRIPTION FACTOR PRE 1 85 IPR044293 GO:0006355|GO:0040008|GO:0046983
Eupl11g00724 108 Gene3D - 12 83 IPR036638 GO:0046983
Eupl11g00724 108 Pfam Helix-loop-helix DNA-binding domain 14 55 IPR011598 GO:0046983
Eupl11g00724 108 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 76 IPR036638 GO:0046983
Eupl11g00724 108 Coils Coil 51 71 - -
Eupl11g00724 108 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 54 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00724 Eupl-Chr11 9302262 9304003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00724 13 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G15160 54.667 8.45e-21 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00724 HLH 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00724 - - dct:110108630 115.546