Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl11g00718 | ATGTCAGGCAGAAGATCGCGTTCCAGGCAGTCAGGGGTTTCGAGGATCACCGATGATCAGATCAACGATCTTGTAACCAAGTTACAACAACTTCTCCCTGAGCTTCACAGTAGGAGCTCAGACAAGGTATCAGCTTCTAAGGTCCTACAAGAGACATGTAACTATATTAAGAGCTTACACAGAGAGGTCGATGACCTAAGCGAGCGGCTATCGGAGTTATTGGCAACGACAGACACCAGTAGTGCCCAAGCAGCTATTATTAGGAGCTTACTTACATGA | 279 | 0.4659 | MSGRRSRSRQSGVSRITDDQINDLVTKLQQLLPELHSRSSDKVSASKVLQETCNYIKSLHREVDDLSERLSELLATTDTSSAQAAIIRSLLT* | 93 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl11g00718 | 92 | FunFam | Transcription factor ILI6 | 7 | 88 | - | - | |
Eupl11g00718 | 92 | Gene3D | - | 2 | 88 | IPR036638 | GO:0046983 | |
Eupl11g00718 | 92 | CDD | bHLH_AtPRE_like | 16 | 76 | - | - | |
Eupl11g00718 | 92 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 19 | 80 | IPR036638 | GO:0046983 | |
Eupl11g00718 | 92 | PANTHER | TRANSCRIPTION FACTOR PRE | 1 | 91 | IPR044293 | GO:0006355|GO:0040008|GO:0046983 | |
Eupl11g00718 | 92 | Coils | Coil | 56 | 76 | - | - | |
Eupl11g00718 | 92 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 5 | 59 | IPR011598 | GO:0046983 | |
Eupl11g00718 | 92 | Pfam | Helix-loop-helix DNA-binding domain | 19 | 60 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl11g00718 | Eupl-Chr11 | 9223712 | 9224424 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl11g00718 | 1 | 91 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G47710 | 70.652 | 8.98e-38 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Eupl11g00718 | HLH | 3.1e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl11g00718 | - | - | ming:122068426 | 151.369 |