Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00710 ATGGGCAACTGCTTGGATGCTTCTGCGCGAGTTGATAACGCGCTGAACTCGCAGAATGCTTCTGGGGCCTCAAAAAATACCAGCAAAACTGGCCTATCTTCAGTTCCTTCCAATCTGACAGTTTCATCTTTCAGCAAAAGTACTGCTGACAGTCTTCCTACTCCAAGATCCGAAGGTGAGATATTGTCGTCCCCGAATTTGAAGGCCTTTTCCTTTAGTGAGCTAAAGAATGCCACTAGAAACTTCCGCCCGGACAGTCTTCTCGGAGAAGGAGGATTCGGTTATGTTTTCAAAGGATGGATCGATGAGCAAACCCTTGCTGCCGCGAGACCTGGATCTGGAATGGTTGTCGCTGTCAAGAAGCTTAAACCAGAAGGTTTCCAAGGCCACAAGGAGTGGTTGACAGAAGTTAACTATCTTGGCCAACTTCATCACCCCAATTTGGTTAAACTCATTGGGTATTGCTTGGATGGTGAGAACCGGCTTTTGGTCTATGAGTTCATGCCAAAAGGCAGCTTGGAGAATCATCTATTTAGAAGAGGGGCCCAACCACTTTCTTGGGCAATAAGGATCAAAGTTGCTGTAGGTGCTGCTAGAGGGCTCTCGTTCTTGCACGATGCTGAATCACAAGTCATCTATAGGGATTTTAAAGCTTCTAATATCCTTCTAGATGCGGAATTCAATGCAAAGCTTTCTGATTTTGGTTTAGCCAAAGCGGGCCCCACTGGTGACAGGACTCATGTTTCCACTCAAGTCATGGGTACTCATGGCTATGCAGCACCTGAATATGTTGCCACAGGTCGGCTGTCTGCAAAGAGTGATGTTTACAGCTTCGGGGTCGTGTTGCTGGAACTATTGTCTGGGCGTCGAGCTGTAGATAAGTCAAAAGTTGGTTCTGAGCAGAATCTGGTAGACTGGGCAAAGCCGTATTTGGGCGACAAGCGCAAGTTATTCCGGATTATGGACACCAAGTTGGAGGGTCAGTACCCCCAGAAAGGAGCCTACACGGCTGCCACCCTCGCCTTACAGTGCCTTAACACCGAAGCCAAAGTTCGGCCACGCATGTCTGAGGTCTTAACAATACTAGAACAACTTCGAGCCTCAAAGAATGCGGCCAAACACTCCCAATCTGAACAGCAAACAATCTCCAAACCCCTCCGCAAATCACCAATGAGAAGTCATCCTTCACCTCTAAATTTGACACCTGGTGCGTCCCCATTACGGTCCCACCGGCAATCCCCACGTGTACGCTAA 1254 0.4825 MGNCLDASARVDNALNSQNASGASKNTSKTGLSSVPSNLTVSSFSKSTADSLPTPRSEGEILSSPNLKAFSFSELKNATRNFRPDSLLGEGGFGYVFKGWIDEQTLAAARPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLDGENRLLVYEFMPKGSLENHLFRRGAQPLSWAIRIKVAVGAARGLSFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLSAKSDVYSFGVVLLELLSGRRAVDKSKVGSEQNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNTEAKVRPRMSEVLTILEQLRASKNAAKHSQSEQQTISKPLRKSPMRSHPSPLNLTPGASPLRSHRQSPRVR* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00710 417 ProSitePatterns Protein kinases ATP-binding region signature. 88 121 IPR017441 GO:0005524
Eupl11g00710 417 Gene3D Transferase(Phosphotransferase) domain 1 168 389 - -
Eupl11g00710 417 FunFam Probable serine/threonine-protein kinase PBL8 168 381 - -
Eupl11g00710 417 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Eupl11g00710 417 PANTHER OS01G0588500 PROTEIN-RELATED 39 366 - -
Eupl11g00710 417 Gene3D Phosphorylase Kinase; domain 1 58 167 - -
Eupl11g00710 417 FunFam Serine/threonine-protein kinase BIK1 49 167 - -
Eupl11g00710 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Eupl11g00710 417 MobiDBLite consensus disorder prediction 369 417 - -
Eupl11g00710 417 MobiDBLite consensus disorder prediction 369 387 - -
Eupl11g00710 417 CDD STKc_IRAK 88 365 - -
Eupl11g00710 417 SUPERFAMILY Protein kinase-like (PK-like) 56 362 IPR011009 -
Eupl11g00710 417 ProSiteProfiles Protein kinase domain profile. 82 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00710 417 MobiDBLite consensus disorder prediction 394 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00710 Eupl-Chr11 9076477 9092340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00710 60 362 Glycoside Hydrolase AT3G07070 54.575 3.07e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl11g00710 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00710 - - nnu:104598283 728.783