Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00709 ATGAGACTTGGGATAAAAGTTCCAGCAGCCAATCAACCAGTAGATACTGCTCGGCCGTCCACTGGAAAGCCTTGTGAAGATATAGGATTTAGCTTCCCACCTGTTCCTAAGGATCAATCACTTCCAATTGTGAACAAGAATGGCGTGCTCCAAGCCTGTATGGGACTTGCAGTTGCTGTAAAAAAACTCAGAAAGAAAGGAGTACAAGGCCACAAGGAGTGGCTGACTGAATTGACTTTTTTGAGCCAATTCAATCATCCCAATGTCGTGAAGCTTATTGGATACTGTTCAGAGAGCGACGATCGGATTCTAGTGTACGAGTATATGGCAAGGGGAAGCTTGGAGGCCTACCTCAGGAGAGATAGTGAGTCCGGGCTAAGTTGGAGTAAGAGAATTAAAGTTGCTGTTGGAGTAGCGAGGGGCTTAGTTTATCTTCATACAGCTAAAGCATCAGTCATTCATCGCGATCTTAAAGCATCTAATATTCTCCTTGACTCGGAATTCAACGCGAAGCTTTCAGACTTTGGACTGGCTAAGTATGGTCCGCAAGGCGACAAGTCCCACATCTCAACTAGAGTACTTGGAACCAGAGGTTACTTTGCGCCAGAGTATGTTGCCACAGGGCATTTGACACTACGGACGGACGTGTACAGCTTTGGCGTCGTACTCTTAGAGATCCTCTCTGGCTGTGGAGCTATCAAGAAACATGCAGATGGGGTGGCAGCGGATCTTGCAGTATGGGCAAAACCATATCTTAGTAACAAGGTGCAACTTTATCGTGTTATTGATAAGAAACTCCAAAGGAACTTTTGCATAGAAGAAGTTTACGAGTTTGCCGACATCATACTAAAATGTCTTAACACGAACGCCAAAAATCGGCCAACCATGACTGAAGTCGTCGCTGCTCTAGAGCAATTAGAGCAACAAATGAAGAAACTTCAATGTAAGTTCATTCAGAATCCACCAACCCGAACGCCTTTTCATAAACAACTTCCTGTGAAACAGGAAGAGTGA 1014 0.4477 MRLGIKVPAANQPVDTARPSTGKPCEDIGFSFPPVPKDQSLPIVNKNGVLQACMGLAVAVKKLRKKGVQGHKEWLTELTFLSQFNHPNVVKLIGYCSESDDRILVYEYMARGSLEAYLRRDSESGLSWSKRIKVAVGVARGLVYLHTAKASVIHRDLKASNILLDSEFNAKLSDFGLAKYGPQGDKSHISTRVLGTRGYFAPEYVATGHLTLRTDVYSFGVVLLEILSGCGAIKKHADGVAADLAVWAKPYLSNKVQLYRVIDKKLQRNFCIEEVYEFADIILKCLNTNAKNRPTMTEVVAALEQLEQQMKKLQCKFIQNPPTRTPFHKQLPVKQEE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00709 337 PRINTS Tyrosine kinase catalytic domain signature 106 119 IPR001245 GO:0004672|GO:0006468
Eupl11g00709 337 PRINTS Tyrosine kinase catalytic domain signature 146 164 IPR001245 GO:0004672|GO:0006468
Eupl11g00709 337 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Eupl11g00709 337 ProSiteProfiles Protein kinase domain profile. 35 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00709 337 PANTHER OS01G0588500 PROTEIN-RELATED 55 307 - -
Eupl11g00709 337 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 109 316 - -
Eupl11g00709 337 SMART serkin_6 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00709 337 SUPERFAMILY Protein kinase-like (PK-like) 55 325 IPR011009 -
Eupl11g00709 337 Gene3D Phosphorylase Kinase; domain 1 46 109 - -
Eupl11g00709 337 Coils Coil 296 316 - -
Eupl11g00709 337 Gene3D Transferase(Phosphotransferase) domain 1 110 322 - -
Eupl11g00709 337 Pfam Protein tyrosine and serine/threonine kinase 56 303 IPR001245 GO:0004672|GO:0006468
Eupl11g00709 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00709 Eupl-Chr11 9071039 9075630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00709 55 303 Glycoside Hydrolase AT3G07070 49.206 1.23e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl11g00709 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00709 - - msin:131237994 367.081