Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00707 ATGGCTGCTCCTCCGGGGTCCTCAGCTCGGCAACCATTGGAAACATTTAGTGAGGATTTGGAAAAAAATTATCTATGGGTTGTAGAGCGGTCTTACCTCAAGCCATTCCTCACCCAAGTTAGCCACTCCTCACTCAAATCCCCTCCTCATCCAGAAATGAATGGAATAGAGAACGAAGGACGGAACGTGAACACAGTCCACCTCCATCTACAACGAGAACAACAACAAGTTAATACAGTAGGTATCCAAGAATCAAAGCAGTCCGTCGATTTCCGCGTCGATTTTCGCTTGAAATTCAAGTATCAATGGCTGCTCCACATGGAGGGAGGAGATTCAACAATCCTTCAGGAGATCGACGGCCTCATGGTAGTGAAATCGTTCTTGGTAAAATCTCGACACTTAACATCTGATTTCACCTCGAGATGGATCATATCTCAAATGCTTTCTCAGATGTACATCCCTTTAGAGCTTCAAGGGGACATGATACAATACATCTCTTCCTGTGCTTGTGCGATGGCGGAGGCAGATTTCAATGTGGGGCGCACGACGCTGCCGATGGTCGTGGATATTATGGTTTTGGAATTCGTACCATATGATGAAGATGATATGATCACACTAGCTTCATCGAATTCGATGGATATCGACGACGAGGACGGGGTTTCCAGGACAGTACCTGCGACAAGATCATCGATTGAGGCATTAGAGAAGGTGAAATTCGACGGTTGGGATTCAGATTTGGGTTGTATGATCTGTTTGGAAGGGTTTTCAATTGGATCGCAAGTGACATGTATGCCTTGCTCGCATGTTTTTCATGGAGGGTGCATCGTTCAATGGTTGGAGAAGAGCAATTTGTGTCCTTTATGTCGCTTTGAGATGCCAAGCTGA 885 0.4565 MAAPPGSSARQPLETFSEDLEKNYLWVVERSYLKPFLTQVSHSSLKSPPHPEMNGIENEGRNVNTVHLHLQREQQQVNTVGIQESKQSVDFRVDFRLKFKYQWLLHMEGGDSTILQEIDGLMVVKSFLVKSRHLTSDFTSRWIISQMLSQMYIPLELQGDMIQYISSCACAMAEADFNVGRTTLPMVVDIMVLEFVPYDEDDMITLASSNSMDIDDEDGVSRTVPATRSSIEALEKVKFDGWDSDLGCMICLEGFSIGSQVTCMPCSHVFHGGCIVQWLEKSNLCPLCRFEMPS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00707 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 213 294 IPR013083 -
Eupl11g00707 294 SUPERFAMILY RING/U-box 242 292 - -
Eupl11g00707 294 ProSiteProfiles Zinc finger RING-type profile. 248 289 IPR001841 -
Eupl11g00707 294 FunFam Uncharacterized protein 211 294 - -
Eupl11g00707 294 CDD RING-H2_PA-TM-RING 248 289 - -
Eupl11g00707 294 SMART ring_2 248 288 IPR001841 -
Eupl11g00707 294 PANTHER SI:CH211-59O9.10 201 292 - -
Eupl11g00707 294 Pfam Ring finger domain 248 289 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00707 Eupl-Chr11 9053483 9059037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00707 225 293 C3H Transcription Factor Family AT1G26800 47.826 3.08e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00707 - - csin:114287989 148.288