LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g00698	ATGGACGCTACCTCGAAAATATCTGCTCATGGAGCTGTAATCAAAGAAGAAAAGAGAGTTCATGAATCTAGTGCTGATGAAGATCAATTTGGAGAGATTGGAAAGGTTGGAAATGGAGGACAGGTTCATGACGACAATAGTTCGAAGCCATCTTCACCTAACCAAAACGATTTAAGAATTAGCAAACAGGTGCCTTCTGTAACTGCAACTGGAAGATCATCAATGGATACAAACTCAAAAGTATCATCTTCAAACAAAAAGGATCAGGAGGAGGATCAGCTTGTTGAATCGGCCAAAGCGGAAATGGGTGAGGTGAGAGAAGAGAATGAAAGATTGAAGAAGATCTTATCTCGAATTGTGAAGGATTACCAGTCTCTCCAAATGCATTTCTTCGACATAGTTCAACAAGAACAAGCTAAGAAATCTACAGATCCAGTTCCCAGCAGCACTCATCAAGGAATTGAAGAGCCTGATGAATTCATTTCACTTAGCCTTGGAAGAAGTTCAAGCGAGTCCAAGAAGGATGAGAAAACTAGCAAATCTAAAGAGGATGAGGAATGGAAAGAAGGTTTAGCACTTGGGTTAGACTGCAAATTTGAAGTGTCTAACCCAGGTACAGGTCCAACGTCTGAACCTGTGTCGAACTCAAGCCCCGAAAATAGCTTTGTCGAACCAAAGGAAGAAGGTGTCCAAGAGCAATGGCCACCCAGTAAAATCCTCAAGACAATGAGGAGTGGAGATGATGAAGTTTCACAACAGACCCCTGTGAAGAAAGCTAGGGTTTCTGTGAGAGCCAGATGTGATACCCCAACGATGATCGATGGATGCCAATGGAGGAAATATGGGCAGAAAATCTCGAAAGGAAATCCATGCCCTCGAGCATACTATCGATGCACAGTTGCACCAGCATGCCCAGTAAGAAAACAGGTGCAAAGATGTGCTGAGGACATGACTATCTTGATCACCACCTATGAAGGAACCCACAACCACCCACTTCCAATATCAGCTACAGCCATGGCTTCCACCACCTCCGCCGCAGCTTGTATGCTAATGTCTGGCTCAACGAGCTCCCGATCAGCCCTTGGAGCCTCGGCGACCAGAACCATTGCTGCCGATCTCCATGGATTGAACTTTAACCTCTCAGATAGTTCAAAATCAAGGCAGTTCTATCTACCTAACTCTTCAATCTCAACGTCATTATCGCCTTCGTATCCAACAATCACCCTCGACCTCACTGCACCCCCATCATCATCTTCATCGTCCACGTCTCAATTCAATAGATTATCTTCAAACTTCCTTACTACACCAAAATACTCTTCAACCGGTTTCAACTTCTCTTCTTCCGAATCCAATACTCTACCAACATCTTGGGGTAATGGGTACCTAAGTTATGGGACTCAGTCCTACAACAAAAACCAAATGCAACCCCAAGAACACATTTATCAGCCTTACTTGCAAAAGAACAATCCAACTCCTCCTCAACAATCTTTGACAGAGACCATTGCCGCTGCAACCAACGCCATAACATCGGACCCAAGTTTCCGATCGGCACTGGCTGCCGCAATCACAACCATTGTCGGTGGCAGTGGTGGAGTAAACCAAGGTGGGGTAGAGAATTTTGGCCAGAATTTGAAGTGGGGTGATCAGCCATTTCCTGTCACTTCTTCCTATTCATCCACGCCGAATGGGATCGGGTGTGCATCGACCTACTTGAACAGATCATCGTCTTCAAAAATTCACCAAGGGAGCTTGATGTTTCTACCGCCTTCATTGCCATTTTCTTCCACCAAGAGTGCTTCTGCGTCTCCTGTTGACAATATGGACCACACCAACTAA	1836	0.4499	MDATSKISAHGAVIKEEKRVHESSADEDQFGEIGKVGNGGQVHDDNSSKPSSPNQNDLRISKQVPSVTATGRSSMDTNSKVSSSNKKDQEEDQLVESAKAEMGEVREENERLKKILSRIVKDYQSLQMHFFDIVQQEQAKKSTDPVPSSTHQGIEEPDEFISLSLGRSSSESKKDEKTSKSKEDEEWKEGLALGLDCKFEVSNPGTGPTSEPVSNSSPENSFVEPKEEGVQEQWPPSKILKTMRSGDDEVSQQTPVKKARVSVRARCDTPTMIDGCQWRKYGQKISKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMTILITTYEGTHNHPLPISATAMASTTSAAACMLMSGSTSSRSALGASATRTIAADLHGLNFNLSDSSKSRQFYLPNSSISTSLSPSYPTITLDLTAPPSSSSSSTSQFNRLSSNFLTTPKYSSTGFNFSSSESNTLPTSWGNGYLSYGTQSYNKNQMQPQEHIYQPYLQKNNPTPPQQSLTETIAAATNAITSDPSFRSALAAAITTIVGGSGGVNQGGVENFGQNLKWGDQPFPVTSSYSSTPNGIGCASTYLNRSSSSKIHQGSLMFLPPSLPFSSTKSASASPVDNMDHTN*	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	1	111	-	-
	Eupl11g00698	611	FunFam	probable WRKY transcription factor 31	257	334	-	-
	Eupl11g00698	611	SMART	WRKY_cls	272	332	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	41	82	-	-
	Eupl11g00698	611	SUPERFAMILY	WRKY DNA-binding domain	266	333	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Eupl11g00698	611	Coils	Coil	95	115	-	-
	Eupl11g00698	611	ProSiteProfiles	WRKY domain profile.	267	333	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	169	193	-	-
	Eupl11g00698	611	Pfam	WRKY DNA -binding domain	274	331	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Eupl11g00698	611	Gene3D	WRKY domain	257	334	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	203	222	-	-
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	83	111	-	-
	Eupl11g00698	611	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	57	534	IPR044810	GO:0003700
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	11	29	-	-
	Eupl11g00698	611	MobiDBLite	consensus disorder prediction	137	233	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g00698	Eupl-Chr11	8959560	8963392	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g00698	102	530	WRKY Transcription Factor Family	AT5G15130	47.516	6.44e-99	309

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Eupl11g00698		WRKY	2.7e-23	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g00698	-		-	msin:131255908	714.146