Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00690 ATGGAGATGACAACTGTGAAGTGTGAAGTAAACCCGGGAAGGCGTCGCTTGTGTATGGTGGACCGCGAAGCCCCGGAGATTAAGTCTGTTAAGAGACGACGGAGAGAGCCCGTTGCAGCTGTGATTGGTTGCGATGATAGTCATACTGAACAAAAACAGCAAGCACAACAAGTTGATCAATCTACTACTAGTACTACTGTCAAGCGAAGTTCGAGGTTTCGTGGAGTAAGCAGACATAGATGGACAGGTCGATTTGAAGCGCACTTATGGGACAAAGGGTCTTGGAACGCGACGCAGAAGAAGAAAGGGAAACAAGGGGCTTATGATGAAGAAGAATCGGCTGCGAGAGCTTACGACTTAGCTGCACTCAAGTACTGGGGGGCTACAACATTCACAAATTTTCCGGTAGCAGACTATGAGAAAGAGATAGAAATAATGCAAAATGTAACAAAAGAAGAGTACTTGGCCTCTTTAAGAAGGAAGAGCAGTGGTTTCTCAAGAGGTGTATCCAAGTATAGAGGAGTTGCAAGGCACCATCACAATGGGAGATGGGAAGCAAGGATAGGGAGGGTTTTTGGAAACAAGTACCTCTACCTTGGCACTTACAGTACCCAAGAGGAGGCTGCCCGTGCTTACGACATCGCCGCAATTGAGTACAGAGGGATCAATGCCGTGACCAACTTCGACTTGAGCACGTATATCAGATGGTTAAGACCAGGGGCTGATGCACTTTTTACTTCTCAGGAACAACAAGCAATTTTAGAATCTCGAGCTGTGCCACCCTCCTCTAACCTCATTCCAAATGAAGAACCTGAGTCGTCGTTCTTCCCTACGAACCCTTTTGCCACAGATGACTTGGGCTCTCCTCAAAAGCAAGAAGTTTTCCAAAGGAAGATCCCTGTTAGACCTTGCAGTAAGACCTCATCACCTACTGCACTCAGTCTCCTTCTTCGATCATCGATATTTAGAGAACTGGTGGAGAAGAACTCAAATGCATCTGACGATGAAACTGACGGGGATGACACAAGGCACCAACCACAGATGGGCAGTGACGACGAGTATGGTGGGATCTATTACGATGGAATTGCAGATATCCCATATGTGTGCTCTAATGACGATACAATGCCTAGTATCGAGTTGCAGGAAGAGAGTCCTTCCTTAATCTACAATCAAACGGAGCAATCCCTATGGAATGGCGTCTTAAGCGTATCTTCTATCCATTAA 1224 0.4632 MEMTTVKCEVNPGRRRLCMVDREAPEIKSVKRRRREPVAAVIGCDDSHTEQKQQAQQVDQSTTSTTVKRSSRFRGVSRHRWTGRFEAHLWDKGSWNATQKKKGKQGAYDEEESAARAYDLAALKYWGATTFTNFPVADYEKEIEIMQNVTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGADALFTSQEQQAILESRAVPPSSNLIPNEEPESSFFPTNPFATDDLGSPQKQEVFQRKIPVRPCSKTSSPTALSLLLRSSIFRELVEKNSNASDDETDGDDTRHQPQMGSDDEYGGIYYDGIADIPYVCSNDDTMPSIELQEESPSLIYNQTEQSLWNGVLSVSSIH* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00690 407 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 51 260 - -
Eupl11g00690 407 CDD AP2 71 137 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 MobiDBLite consensus disorder prediction 47 71 - -
Eupl11g00690 407 Gene3D AP2/ERF domain 71 137 IPR036955 GO:0003700|GO:0006355
Eupl11g00690 407 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Eupl11g00690 407 MobiDBLite consensus disorder prediction 328 354 - -
Eupl11g00690 407 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 CDD AP2 170 231 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 SUPERFAMILY DNA-binding domain 71 136 IPR016177 GO:0003677
Eupl11g00690 407 SMART rav1_2 72 141 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 Pfam AP2 domain 71 127 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 MobiDBLite consensus disorder prediction 328 348 - -
Eupl11g00690 407 SUPERFAMILY DNA-binding domain 170 231 IPR016177 GO:0003677
Eupl11g00690 407 FunFam AP2-like ethylene-responsive transcription factor 170 231 - -
Eupl11g00690 407 ProSiteProfiles AP2/ERF domain profile. 72 135 IPR001471 GO:0003700|GO:0006355
Eupl11g00690 407 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00690 Eupl-Chr11 8875472 8877879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00690 26 233 AP2-EREBP Transcription Factor Family AT5G57390 57.820 3.14e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl11g00690 AP2 5.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00690 - - vri:117930058 553.132