Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00675 ATGGGATTAGGTCTTGATGCTAGTCAGGCGGAGGAATGGAATGTGGGGAAATCAAAGGGGAGGAGGAAGAAGAAAGACGGTGCAGCAGCAGAGAAGGAGAACGGGTGTTGGATTAAGTTCAGGTTTATGGGTAGCTGCATCTCTTCAAGATCCAAAGTAAATAGCTCTATAAGCGGCACCAGCACTCATTGCGGTTCTGTGTGTGGACCAGCAGAAAGTAAATCTACAAATGATACCATCAGAGAGCAACCAGTTGCTCCAGTAGTATCTTCTACAACCACTAGTAATGCAGGAAGTACCCAATCTACTCCCGAAGTAGCAGAGGATCTAAAAGTTGCTTCTCAGCTTCGAAAATTCACATTTAACGAGCTTAAATTGGCAACGAGGAATTTTAGACCAGAGAGTCTTCTTGGCGAGGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAGGAGAACGGAACTGGTCCAGTGAAACCTGGCACTGGACTTACTGTTGCAGTTAAAACCCTCAACCATGATGGACTTCAGGGTCATAAAGAGTGGCTGGCTGAAGTTAATTTTCTCGGTGACCTCCTCCATCCAAATCTGGTTAAATTGATTGGTTACTGCATTGAAGATGATCAAAGGCTGCTAGTATATGAGTTTATGCCTCGAGGAAGCTTGGAGAACCACCTCTTTAGGAAAGGGTCCTTGCCTCTTCCGTGGTCCATCAGAATGAAAATTGCACTTGGTGCTGCAAAGGGCCTTGCTTTTCTTCATGAGGAAGCAGAAAGGCCAGTAATTTATCGCGATTTTAAAACATCTAACATCCTGTTAGATGCGGACTACAATGCCAAGCTCTCTGACTTTGGACTTGCCAAAGATGGCCCTGAGGGAGATAAGACTCATGTGTCAACTAGGGTGATGGGAACTTATGGCTATGCAGCCCCTGAGTATGTGATGACAGGGCATCTGACATCAAGGAGTGACGTCTACAGCTTTGGGGTGGTCTTACTTGAGATGCTGACTGGCCGAAGATCCATGGACAAAAACCGACCAAACGGGGAGCATAATCTAGTGGAATGGGCAAGGCCACATCTTGGGGAGAGGCGACGGTTTTACCGGCTGATAGACCCCCGCCTTGAAGGTCATTTCTCCATCAAAGGCGCACAGAAGGCGGCCCAGCTGGCCCACCACTGTCTTAGCCGGGACCCGAAAGCCAGACCTCTTATGAGCGAAGTTGTTGAAGTCCTGAAGCCTCTGCTGAATCTAAAGGACATGGCCAGCTCCTCCTACTATTTCCAGACCATGCAAGCAGAGCGGACGGGGGCCAATCCCAACAACCCAAATGCTAGAAATGGCCTAAGAACACAGGTAGTGTCTCTATCAAGGAATGGGCAACCGACAAGAAGCCTCTCAATGCCGAATGGTTCACATGCATCTCCCTACCACCATCACCACCACCCGTCACCGAAGCCAAATGGTAAACAGCCATAG 1479 0.4841 MGLGLDASQAEEWNVGKSKGRRKKKDGAAAEKENGCWIKFRFMGSCISSRSKVNSSISGTSTHCGSVCGPAESKSTNDTIREQPVAPVVSSTTTSNAGSTQSTPEVAEDLKVASQLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTGPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLLHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAHHCLSRDPKARPLMSEVVEVLKPLLNLKDMASSSYYFQTMQAERTGANPNNPNARNGLRTQVVSLSRNGQPTRSLSMPNGSHASPYHHHHHPSPKPNGKQP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00675 492 CDD STKc_IRAK 137 415 - -
Eupl11g00675 492 ProSitePatterns Protein kinases ATP-binding region signature. 137 169 IPR017441 GO:0005524
Eupl11g00675 492 PANTHER OS01G0588500 PROTEIN-RELATED 92 415 - -
Eupl11g00675 492 MobiDBLite consensus disorder prediction 1 28 - -
Eupl11g00675 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Eupl11g00675 492 FunFam Probable serine/threonine-protein kinase PBL8 217 433 - -
Eupl11g00675 492 FunFam Serine/threonine-protein kinase BIK1 98 216 - -
Eupl11g00675 492 Gene3D Phosphorylase Kinase; domain 1 111 216 - -
Eupl11g00675 492 MobiDBLite consensus disorder prediction 475 492 - -
Eupl11g00675 492 Gene3D Transferase(Phosphotransferase) domain 1 217 434 - -
Eupl11g00675 492 Pfam Protein tyrosine and serine/threonine kinase 135 412 IPR001245 GO:0004672|GO:0006468
Eupl11g00675 492 MobiDBLite consensus disorder prediction 67 106 - -
Eupl11g00675 492 ProSiteProfiles Protein kinase domain profile. 131 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00675 492 SUPERFAMILY Protein kinase-like (PK-like) 109 412 IPR011009 -
Eupl11g00675 492 MobiDBLite consensus disorder prediction 458 492 - -
Eupl11g00675 492 MobiDBLite consensus disorder prediction 458 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00675 Eupl-Chr11 8698890 8717558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00675 108 412 Glycoside Hydrolase AT3G07070 56.958 3.71e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl11g00675 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00675 - - msin:131248802 814.298