Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00664 ATGAGCCGTAAGAGAGTGAAACCCTACCTCTCCCGGCATGTCACCTCTTCTCTTCCGAAGAGGCCTCGCTTCATGCCCTCCTCGGAATCAGAGACCCCCGTAGACGAAGAGGCTAACAGACCCACCAAGCAGAACTCTGCCACCGTGGTCGTGACCGGCTTCTCCCTTGCCTGCTCTATTCTCGAGCTCAAATCTCGATTCCAGATGTACGGATGTATCTCCCGCATCCGCATCGACCGCGGCATCGGCTACATCACTTTCCGTTCCAAGGACTCCGCTGAGGCTGCCATTGCCGCTGCCGTGGATTCCTCCTTCGGCATTACAGTTGAATCCAAAAAGGTGCAAGTATATCAGGCAAATGACCCTCTTCCTCAATGGAGAGAAGGAGTTCAGCTTTCTTCTATCAAGGATCAGCCCTCATCCAAGCTGCTACGGGCTGAAGTACCTCTAAGCAGACATGGCAGAGGTAATAAGCTTGGTAAAGGTACAGTGAGTCCCAAAAATAGGCTAGAGTTGCCTTTCAGAGGCCGAGAAATCATTGCTTATGACGATCTTCTTTGA 561 0.5187 MSRKRVKPYLSRHVTSSLPKRPRFMPSSESETPVDEEANRPTKQNSATVVVTGFSLACSILELKSRFQMYGCISRIRIDRGIGYITFRSKDSAEAAIAAAVDSSFGITVESKKVQVYQANDPLPQWREGVQLSSIKDQPSSKLLRAEVPLSRHGRGNKLGKGTVSPKNRLELPFRGREIIAYDDLL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00664 186 CDD RRM_SF 49 92 - -
Eupl11g00664 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 121 IPR000504 GO:0003723
Eupl11g00664 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 99 IPR000504 GO:0003723
Eupl11g00664 186 SUPERFAMILY RNA-binding domain, RBD 42 121 IPR035979 GO:0003676
Eupl11g00664 186 SMART rrm1_1 48 117 IPR000504 GO:0003723
Eupl11g00664 186 MobiDBLite consensus disorder prediction 1 44 - -
Eupl11g00664 186 Gene3D - 34 125 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00664 Eupl-Chr11 8578018 8583825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00664 1 186 Homeobox Transcription Factor Family AT1G27050 42.029 3.19e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00664 - - nnu:109113946 206.068