Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00654 ATGGGAGTTGATTACTACAACATATTGAAGGTGAGCAGGAGTGCAAGTGAGGAGGACCTAAAGAAGGCGTACAGGAGACTGGCCATGAGATGGCATCCGGACAAGAACCCTTCCACCAAAAAAGAAGCGGAAGCCAAGTTCAAACAGATCTCCGAGGCCTATGACGTCCTCAGCGACCCCCAAAAGCGTCAGATCTACGATCTCTACGGCGAAGAAGCCCTCAAGTCCGGTCAGGTCCCTCCTCCATCCTCCGCTCCTGCTTATGCTGCAGGTGGTGGTCCACACCCTAACCCGTCCTTCCGGTTCAATCCCAGGGATGCTGATGACATATTTGCTGAATTTTTCGGTGGATCCGACGGTGGTGGTCGCAGTCGTGTTTTTGGGGAGACTCTTTTCAGGAATTCTAATGGGGACATTGGTTACCAGACGCCTCGGAAAGCAGCGGCGATGGAGAATAAGTTGCCTTGTAGTCTGGAGGAGCTCTACTCGGGTACAACCAAGAAAATGAAGATTTCAAGAACCGTTGTCGATGCTTATGGTAAGGCAAGGACTGTGGAGGAGATCTTGACCATCGATATCAAACCTGGTTGGAAGAAGGGCACAAAGATCACATTCCCTGAGAAGGCTAACCAAGAGCCTGGGGTCATTCCCGGAGACCTTGTTTTCCTGGTAGACGAGAAGCCCCACGGAGTTTACAAGAGGGATGGGAACGATCTGGTGATCAACCAAAGGATTCCTCTGCTGGAGGCCCTAACAGGGAAGACCCTTAACCTAACAACCCTGGACGGAAGGAATCTGATGATCCCGGTTACAGATATCGTCAGGCCAGGCTATGAGATGGTGGTCCCAAATGAAGGAATGCCTATCTCGAAGGAACCCGGAAAGAAAGGGAACCTAAGAGTCAAGTTTGATGTCAAATTCCCATCAAGGCTCACTGCAGAACAGAAATCAAGTCTGAGGAGGGTGTTGGGAGGGAGCTGA 981 0.5097 MGVDYYNILKVSRSASEEDLKKAYRRLAMRWHPDKNPSTKKEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQVPPPSSAPAYAAGGGPHPNPSFRFNPRDADDIFAEFFGGSDGGGRSRVFGETLFRNSNGDIGYQTPRKAAAMENKLPCSLEELYSGTTKKMKISRTVVDAYGKARTVEEILTIDIKPGWKKGTKITFPEKANQEPGVIPGDLVFLVDEKPHGVYKRDGNDLVINQRIPLLEALTGKTLNLTTLDGRNLMIPVTDIVRPGYEMVVPNEGMPISKEPGKKGNLRVKFDVKFPSRLTAEQKSSLRRVLGGS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00654 326 SMART dnaj_3 3 62 IPR001623 -
Eupl11g00654 326 MobiDBLite consensus disorder prediction 74 103 - -
Eupl11g00654 326 FunFam Dnaj homolog subfamily b member 146 227 - -
Eupl11g00654 326 PRINTS DnaJ domain signature 6 24 IPR001623 -
Eupl11g00654 326 PRINTS DnaJ domain signature 62 81 IPR001623 -
Eupl11g00654 326 PRINTS DnaJ domain signature 42 62 IPR001623 -
Eupl11g00654 326 PRINTS DnaJ domain signature 24 39 IPR001623 -
Eupl11g00654 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 232 318 IPR008971 GO:0006457|GO:0051082
Eupl11g00654 326 FunFam DNAJ heat shock family protein 228 323 - -
Eupl11g00654 326 CDD DnaJ 4 59 IPR001623 -
Eupl11g00654 326 Gene3D - 229 309 - -
Eupl11g00654 326 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Eupl11g00654 326 Gene3D - 148 227 - -
Eupl11g00654 326 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Eupl11g00654 326 CDD DnaJ_C 153 311 - -
Eupl11g00654 326 Pfam DnaJ C terminal domain 151 308 IPR002939 -
Eupl11g00654 326 Gene3D DnaJ domain 3 127 IPR036869 -
Eupl11g00654 326 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 323 - -
Eupl11g00654 326 SUPERFAMILY Chaperone J-domain 3 121 IPR036869 -
Eupl11g00654 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 229 IPR008971 GO:0006457|GO:0051082
Eupl11g00654 326 Pfam DnaJ domain 4 67 IPR001623 -
Eupl11g00654 326 FunFam DnaJ subfamily B member 13 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00654 Eupl-Chr11 8412879 8418039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00654 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 4.68e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00654 K09510 - vvi:100246709 488.419