LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g00640	ATGTCCGAAGAAGCCTCGGTCGCAGCTGCGATCCCCCAAGAAGGATCGTCCCTGCAAGAGCAGTGGCGCAACAACAACAACAACCACAACAACGACAAGAACAACAACAACAACAACAATCACAACAACGACAAGAACAACAACAACAACAACCACAACGACAACAGCAATCACAACAACAAGGCACGAAAAGAGCGCCTCCCTCGCGCATGTACCGCCCGCTCCGCCGCTCGCCTCTACTCCTCCGCGCCCGCCGTCGACCGTAAAACCGGTCCTACCAAGAAAGAGAAAGCCGAGCAGCGAGACCAGCAACAGCAATGCAGCAAGATCATTACACCGCTTGTTAACTCGCCGCCGCCTTCGCAATTGCCGCGGTGGAGTCTCCGCTCGATGTGGGAGTTTGCTTCCCTACTTAACTTCTTGCATATTTTTAGGCCGCTTTTGAATATTGCGGTCGAGTTCACGGCGGAGGAACTTGAGACTGCGCTGATTACACCGAATAGTACATTGGACGACGTTCACATTCCTTTGTTAAAGGCAATTCCTCCTGTTACCCGAATGGCGTTGGGGCGTGCTACCTGGGTTACAGTGTTATGCAGAAAGTTGAGGGACTGGTGGCATTGGGTTGCGGATGGAGAGATACCAGTTGTTGCATCTCAAGGGATGGAGGGCGAAATATATAAGGCACTTGATCCTGGGACTCGTGTAGTGATTCTGAAAGCGCTATGTGACATCCGTGTTGAGCAAGAAGATATCCGAAACTACATTGATAACAATTTAAAGCATGGCGTACAACTTTCAGTATTTCGCAAAGAACGTATTGGGGGTGATTCACATGGAATTTCATACTGGTATGAAGATGATCCTATCATTGGTCATCGGTTGTATCGGGAGATTAGAAAAGTTGAGGTGAAGAAGGTGAAGGCAAAGGGGATTCCATCTCTTTCCACTGTGTCTTGCCAGTGGGAAACAATTGCAACCAATTTGGATGAATTCCAAGATGTTTCTGAGAAGCTTTTCTTGAGTAAAAACAGAACAGAGGCTGCTGTTGGAAAGAAGTTAAAAATAGACATGCTTCCAGAGATTGAGAAGATCCATAAGAGAAAAGAGAAGTTGCTGAAAAAACAACATAGACAAGCCATTCTTCTTGATAGCTTTTTGAGTACAGATGGACATGGGCTTGCCACAGGACGCTCTCTTCGTGACAGAAAACCTGTCACCTATACTTTTGATGATTTCGACCGGTCAATCAATGAGGCCATTAAAATAACTAAGCGAAGACAACCCTCCCCAGAACCTATTGTCAGAAGAGAAGCTGCTGTGAAACCTGAGGCATCTACTAATGGTAGATGGAATGGTCCTTCACATGCCCCTCAAAATGTCTCCTATGATGTGCTGTCCCCCAAGTCATCTGATTATGAAGAAACTGATGGAGAGGATAAATCTGGACCTCTAGACCGTAGCAATCGGCGGAGGCAGAGGCCTCAGAGATATTCAGAAAAGGAGTTTGTTGAAGCTGTTTCAGATAATGAGGCAGACTTCGACAGCGATGATGATATAGTTGGAGAAGCAATATATGACGAGGAATACTTGAGAAGCCGGAAACAAAGGAAGTTGTCCAGCAGCTCTGAGGGAGATGAGGAGTACCATTGGGATGAAGAAAATGCCGAAGAAGAAGAAGAAGAAGATGATGATGACGATGATGTTGATTCTTTGAGTAATAGTGAGGATACTGATGAGCCCCACAGATCAAAGAAACTCTCAAGTCGTATCAGTAGAAGGGGAACCAAATTAAGGTCCGTTGATGAGCTCCAGTCGGGCCTCAGACGGAGCAAGAGGGCCACACGAAATCGTATCAATTATCGACAATACGATTTGTCAGAATCGGAAGCCGATTCCATGAAACCTGAGAAGTCAAATGTATCGGGGGGACACTCAGATTCAAGCAATAATGTGGACTCCTCGATGGGAAGTCAAGTTTCGCGGGGCAATGTTGATGAAGGGGAAATGAAAGTTGATCAACCAGTTCAAGAATACAATAATACGGTTGACAAAGAGCCAAGCCAGACACCTGACAAAAAAAATAGCCCAGGTCGAGAAGAAGCTGAAGGTGCAGGGAAAAGGCGATTTCTGGACCTAAACGAGCTTGCCCCAGGTACCAGTTTCGATGATGGGCCCAGCATGAATATGAGAGATGAAGACGCCGACAACTTCTAA	2217	0.4641	MSEEASVAAAIPQEGSSLQEQWRNNNNNHNNDKNNNNNNNHNNDKNNNNNNHNDNSNHNNKARKERLPRACTARSAARLYSSAPAVDRKTGPTKKEKAEQRDQQQQCSKIITPLVNSPPPSQLPRWSLRSMWEFASLLNFLHIFRPLLNIAVEFTAEELETALITPNSTLDDVHIPLLKAIPPVTRMALGRATWVTVLCRKLRDWWHWVADGEIPVVASQGMEGEIYKALDPGTRVVILKALCDIRVEQEDIRNYIDNNLKHGVQLSVFRKERIGGDSHGISYWYEDDPIIGHRLYREIRKVEVKKVKAKGIPSLSTVSCQWETIATNLDEFQDVSEKLFLSKNRTEAAVGKKLKIDMLPEIEKIHKRKEKLLKKQHRQAILLDSFLSTDGHGLATGRSLRDRKPVTYTFDDFDRSINEAIKITKRRQPSPEPIVRREAAVKPEASTNGRWNGPSHAPQNVSYDVLSPKSSDYEETDGEDKSGPLDRSNRRRQRPQRYSEKEFVEAVSDNEADFDSDDDIVGEAIYDEEYLRSRKQRKLSSSSEGDEEYHWDEENAEEEEEEDDDDDDVDSLSNSEDTDEPHRSKKLSSRISRRGTKLRSVDELQSGLRRSKRATRNRINYRQYDLSESEADSMKPEKSNVSGGHSDSSNNVDSSMGSQVSRGNVDEGEMKVDQPVQEYNNTVDKEPSQTPDKKNSPGREEAEGAGKRRFLDLNELAPGTSFDDGPSMNMRDEDADNF*	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	1	106	-	-
	Eupl11g00640	738	PANTHER	REMODELING AND SPACING FACTOR 1	63	689	IPR028938	GO:0006355\|GO:0031213
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	639	662	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	57	71	-	-
	Eupl11g00640	738	Pfam	DDT domain	138	181	IPR018501	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	470	508	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	422	738	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	89	103	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	448	469	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	509	524	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	12	56	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	547	574	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	422	439	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	595	610	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	687	710	-	-
	Eupl11g00640	738	MobiDBLite	consensus disorder prediction	525	546	-	-
	Eupl11g00640	738	Pfam	WSTF, HB1, Itc1p, MBD9 motif 1	223	257	IPR028942	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g00640	Eupl-Chr11	8214245	8229272	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	DDT	Eupl11g00640		DDT	2.7e-05	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g00640	-		-	nnu:104596414	998.038