Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00632 ATGAATTTGTATCTGGATATGGATCCTCCGTCGTTGATCAGCCAAGATTCGTTTCCCCCTACGAACGTGTCTTCGTATAGTCTGGCTGAGATTTGGTCGTTTCCGTTCAATGGCAGTGGCGGTGTAGGAGAATCCGGTGGTGTTTCGGGTGCGGGGAGAAGTCATTTTGGGCTGAATTTGGGTGGATTTGGGGAGATGACGGGGACTGGGAATCGGGATGTTTCGGTTGATGAGTCCACGGTGACGGAGCAGAGCGGGAGAAGCTGTGGCGGGGGTGGGGGTGGGAGGAAGCGGAGAGATGCGGTGGCTTTGGTTTCAGAGGATGAGTCTTCTAAGCTTGTTTCTACCAGCAGTGGCAATGACATGAACGATTGTGAAGCTAAACGGCTAAAACTCTCGGGATCCAGGGAAGAAAATGGCGACTTGAAGGTTGAGGTGGAAGCAAGTTCGGGTGTCGGTAATAAGCAGGCTGAGCAAAGCACTGAACCCTCTGAGCCGCCTAAGCAAGACTACATCCATGTTCGAGCAAGAAGGGGTCAAGCTACTGATAGCCACAGCCTAGCAGAGAGAGCTAGGAGAGAAAAGATCAGCGAGAGGATGAAGATTCTACAAGATCTGGTCCCTGGATGTAATAAGGTGATCGGCAAAGCTTTGGTCCTTGATGAGATAATCAATTACATCCAATCACTACAGCGTCAGGTTGAGTTCCTGTCGATGAAGCTTGAAGCGGTTAATTCAAAAATCAGCCCCATTATTGAAGGATTTCCTCCTAAAGACTTTGGTGCAGCATTATTTGATACTGCTGGTATGGCATTTGGCTCACAAGCAACTAGGGAATATGGCCAGGGATCACCACCAGAATGGCTGCATATGCAGGTTGGTGGCGGTTTTGAAAGAGCAACATAA 906 0.4934 MNLYLDMDPPSLISQDSFPPTNVSSYSLAEIWSFPFNGSGGVGESGGVSGAGRSHFGLNLGGFGEMTGTGNRDVSVDESTVTEQSGRSCGGGGGGRKRRDAVALVSEDESSKLVSTSSGNDMNDCEAKRLKLSGSREENGDLKVEVEASSGVGNKQAEQSTEPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSKISPIIEGFPPKDFGAALFDTAGMAFGSQATREYGQGSPPEWLHMQVGGGFERAT* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00632 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 248 IPR036638 GO:0046983
Eupl11g00632 301 MobiDBLite consensus disorder prediction 77 125 - -
Eupl11g00632 301 Gene3D - 177 251 IPR036638 GO:0046983
Eupl11g00632 301 MobiDBLite consensus disorder prediction 109 123 - -
Eupl11g00632 301 CDD bHLH_AtBPE_like 170 255 - -
Eupl11g00632 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 230 IPR011598 GO:0046983
Eupl11g00632 301 Coils Coil 227 247 - -
Eupl11g00632 301 MobiDBLite consensus disorder prediction 152 166 - -
Eupl11g00632 301 Pfam Helix-loop-helix DNA-binding domain 184 231 IPR011598 GO:0046983
Eupl11g00632 301 FunFam Basic helix-loop-helix transcription factor 177 249 - -
Eupl11g00632 301 MobiDBLite consensus disorder prediction 148 169 - -
Eupl11g00632 301 SMART finulus 186 236 IPR011598 GO:0046983
Eupl11g00632 301 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 103 271 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00632 Eupl-Chr11 8117434 8121431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00632 7 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 54.153 7.18e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00632 HLH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00632 - - ming:122075714 423.705