Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00624 ATGAACAGATCAAGAGAGAAAGCTAGACTCCTCCCTCTCCTTCTCTCCTCCTTCATAGCTGTTCTTATTGTCGTCTCAGGCTTGGTTGAAGAGGACGACTTAAGGTGTCTCGAAGGCTTGAAGAACTCTCTCAACGATCCTCAAGCGAAGCTCAGTTCATGGACCTTCTCCAACACTTCAATCGGTTTCATCTGCAAGTTCGTCGGCGTCTCGTGTTGGAACGAGAAGGAGAATCGCCTGATCGGTCTGCAACTCCCATCGATGGAGCTCGCCGGAGAGATTCCTGACTCGCTCCAGTACTGCCAGAGCCTCCAGACGCTCGATCTCTCTGGTAACGCTCTCTCTGGTAATATCCCTTCTCAAATTTGTGATTGGCTGCCTTACCTCGTAAATCTAGATCTCTCCCGAAATGAATTCTCTGGTCCAATCCCGCCAGAGCTCGTTAATTGCAAGTATCTCAACACTCTTATCCTCGGAAACAATCGTCTCTCCGGTCCAATCCCTTACGAGCTGTCTCGTCTTAGTCGTCTCAAGAAGCTTTCGGTTGCTAATAACCGTCTTTCTGGTCAGATCCCTTCGTTTCTGTCCAATTTCGATTCTGCTGATTTCGATGGGAACAGTGAACTCTGTGGTAGGCCTCTTGGATCCAAGTGTGGAGGTTTGGGCAAGAGGAATCTCATTATCATAATAGCTGCTGGTTTTTTCGGTGCTGCTGTTTCGTTGCTGTTAGGTTTCGCACTTTGGTGGTGGTGCTTTGCTAGGTCGAGCCGTCGCCGCCGTAAGAGAAGGGCTGGGACTGGCAAATATGATGATAGCAGTTGGGCGGAGCGGTTGAGCGCTTTCAAGCTTGTTCAGGTTTCCTTGTTTCAGAAACCTCTTGTAAAGGTCAAGTTGACTGATTTAATGGCCGCAACCAATAATTTTGATCCGGAAAACATTTTCATTTCAACTAGAACCGGGACTTCATATAAGGCAGTTTTGCCTGATGGGTCAGCCCTTGCCATCAAACGGCTCCATACTTGCAAGCTTAGTGAGAAGCAATTTCGGTCGGAGATGAACAGATTAGGGCAGCTTAGGCACCCCAATTTGGTTCCCCTTTTGGGGTTCTGTGTTGTGGAAGATGAGAAACTTTTAGTGTACAAGCACATGCATACTGGGACTCTGTTTTCTATACTGCACGGTAGTGGTAATCCGAATGGTCAGGATGGTCCATTGGATTGGTCAACTAGGCTTAAGATTGGTATCGGTGCTGCAAGGGGACTCGCTTGGCTTCACCACGGCTGCCAACCGCCATTCCTTCACCAGAACATAAGCTCTAATGTGATTCTGCTTGATGAAGATCTTGATGCTCGGATAACGGATTTTGGACTGGCGAGGCTCATGAGTTCTGCAGACTCTCATGAGAGCACTTTTGTCAATGGGGATTTGGGAGAATTTGGTTATGTTGCTCCTGAGTATTCAAGCACCATGGTTGCCTCTCTGAAAGGGGATGTTTATGGACTTGGAGTAGTGCTTCTGGAGTTGGTGACTGGACAGAAGCCTCTTGAAGTCATTAATGCTGAGGAAGGATTCAAGGGGAACCTAGTAGACTGGGTCAATCAACTCTCTGGCTCCGGCCAAATCAACAATGTTATTGATATGTCTCTCTGTGGAAGGGGCCACGATGATGAGATTCTGAAGTTTCTGAGGGTCGCATGTGCTTGTGTGGTTTCTAGTCCCAAGGACAGGTATTCTATGTACCAAGTTTACCAGTCGTTGAGGACCATTGGTGAGGGCCACGATTTTTCAGAACAGTTTGATGAGTTTCCACTGATTGTTGCCAAACAAGATCCTGATCATCTGGAGTAG 1848 0.4762 MNRSREKARLLPLLLSSFIAVLIVVSGLVEEDDLRCLEGLKNSLNDPQAKLSSWTFSNTSIGFICKFVGVSCWNEKENRLIGLQLPSMELAGEIPDSLQYCQSLQTLDLSGNALSGNIPSQICDWLPYLVNLDLSRNEFSGPIPPELVNCKYLNTLILGNNRLSGPIPYELSRLSRLKKLSVANNRLSGQIPSFLSNFDSADFDGNSELCGRPLGSKCGGLGKRNLIIIIAAGFFGAAVSLLLGFALWWWCFARSSRRRRKRRAGTGKYDDSSWAERLSAFKLVQVSLFQKPLVKVKLTDLMAATNNFDPENIFISTRTGTSYKAVLPDGSALAIKRLHTCKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEDEKLLVYKHMHTGTLFSILHGSGNPNGQDGPLDWSTRLKIGIGAARGLAWLHHGCQPPFLHQNISSNVILLDEDLDARITDFGLARLMSSADSHESTFVNGDLGEFGYVAPEYSSTMVASLKGDVYGLGVVLLELVTGQKPLEVINAEEGFKGNLVDWVNQLSGSGQINNVIDMSLCGRGHDDEILKFLRVACACVVSSPKDRYSMYQVYQSLRTIGEGHDFSEQFDEFPLIVAKQDPDHLE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00624 615 Pfam Protein tyrosine and serine/threonine kinase 332 522 IPR001245 GO:0004672|GO:0006468
Eupl11g00624 615 CDD STKc_IRAK 316 586 - -
Eupl11g00624 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 219 - -
Eupl11g00624 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 195 589 - -
Eupl11g00624 615 Gene3D Ribonuclease Inhibitor 31 220 IPR032675 -
Eupl11g00624 615 ProSiteProfiles Protein kinase domain profile. 308 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00624 615 SUPERFAMILY Protein kinase-like (PK-like) 285 586 IPR011009 -
Eupl11g00624 615 SUPERFAMILY L domain-like 31 206 - -
Eupl11g00624 615 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Eupl11g00624 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 269 382 - -
Eupl11g00624 615 Gene3D Phosphorylase Kinase; domain 1 268 382 - -
Eupl11g00624 615 Gene3D Transferase(Phosphotransferase) domain 1 383 608 - -
Eupl11g00624 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 383 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00624 Eupl-Chr11 7979283 7982016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00624 31 610 Receptor kinase-like Gene Family AT1G27190 65.862 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Eupl11g00624 PK_Tyr_Ser-Thr 2.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00624 - - nnu:104608009 943.725