Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00622 ATGTTGCGCAGCTGCTCGCAGTGCGGCAACAACGGCCACAACTCTCGCACCTGCACCGAGAACGGTGGCGATGCTGGTGGCGCCGCCACTGGTGGGTTCATGCTCTTTGGAGTCCGAGTCACCGAGGACTCGATCCGTAAGAGCGTCAGTATGAACAATCTATCTCAATACGAGCAGTCCCAGTCCCACGAGCCTAACGCCGATTTTGCCGCTGGTTACGCCTCCGATGACGTCGTCCACACTTCCGACGGAAACCGCGAGCGCAAGAGAGGAGTTCCATGGACGGAAGAAGAACATCGGCTTTTCCTACTAGGCTTGCAGAAAGTAGGGAAAGGGGATTGGAGAGGAATTTCTAGAAACTTCGTGAAAACTCGTACGCCAACACAGGTTGCAAGCCATGCTCAGAAGTACTTCCTCCGAAAAAACAACCTCAACCGGAGACGCCGTAGATCTAGTCTCTTCGACATCACCACCGACACTTTCATGGGATTGCCAGTTGAAGAAGAAAGCGTTCGGCAAGAATCCACAACTCAGCTACCTCCTCACGTCAGCTGCAATTTAGGATTTCTGGCGCCACCGTATCTGATGACGCTTGGTCCTGTAGTGTTACCGGAGAAACCAGTAGTAGAGAATCTGACGCACATGCCGACAAAGATCAGCCGTCCAAAACCTGTAATTCCGGTCCCACCATCGTCGAGGATGGCAGATCTTAATTTGAATCAGAAATCAACATTGGATCAATCGCCTTTAGCTCTGAAGCTGGCTACATCTTCGGATCACTCGGCTTTTCAGGCCATGTCGAATTTCAGCAACGGGGATCTTGATTCGAACGGAGGAAGCAATAGCATTATCAGTGTTGCTTGA 864 0.515 MLRSCSQCGNNGHNSRTCTENGGDAGGAATGGFMLFGVRVTEDSIRKSVSMNNLSQYEQSQSHEPNADFAAGYASDDVVHTSDGNRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRKNNLNRRRRRSSLFDITTDTFMGLPVEEESVRQESTTQLPPHVSCNLGFLAPPYLMTLGPVVLPEKPVVENLTHMPTKISRPKPVIPVPPSSRMADLNLNQKSTLDQSPLALKLATSSDHSAFQAMSNFSNGDLDSNGGSNSIISVA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00622 287 Gene3D - 92 144 - -
Eupl11g00622 287 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Eupl11g00622 287 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Eupl11g00622 287 CDD SANT 93 138 IPR001005 -
Eupl11g00622 287 PANTHER TRANSCRIPTION FACTOR KUA1 3 204 - -
Eupl11g00622 287 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Eupl11g00622 287 SMART sant 90 140 IPR001005 -
Eupl11g00622 287 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 141 IPR006447 GO:0003677
Eupl11g00622 287 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Eupl11g00622 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Eupl11g00622 287 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Eupl11g00622 287 FunFam transcription factor MYB1R1 92 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00622 Eupl-Chr11 7969018 7970565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl11g00622 Myb_DNA-binding 8.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00622 - - nnu:104596258 397.897