Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00610 ATGGAGAAGGTAAAAGGCTTCGCTCCTTCCTCGGTGGATTCACAAGAACTCCATGTTCTTGCTGTTGACGATAGCCTCGTCGATCGAAGTGTTATCGAACGGTTGCTCAAGATCTCCTCTTGTAAAGTGACTTCGGTCGATAGTGGAAGGAGAGCTCTGCAAATCCTTGGGTTAGATGAAGAGAAAAGCTCCGTTGGAGTCGATGGTTTGAAGGTGAATCTGATTATTACGGACTACTGGATGCCTGGAATGACAGGATATGAGCTTCTCAAGAAGATCAAGGAATCTTCAACTTTCAGAGAGATACCAGTGGTGATCATGTCGTCGGAAAACGTCGTGGCTCGGATCGAAAGGTGTTTAGAGGAAGGAGCGGAGGAATTTATAGTGAAGCCAGTAAAGCTATCGGATGTGAAACGTTTGAAAGATTACATAACGAGAGAAGAAGGGGATGGAGAAGAAGAGAAGGGGACCCACAAGAGGAAGTTCCAATATACGAGTGATGACCCTTCGTCGTCGTCGTCATCATCATCGTCGTTAGAACCTCCTTCAAGACGGCTTAGAACGATCGACGGCAGTGATGGAAGCACCTTATAG 594 0.4646 MEKVKGFAPSSVDSQELHVLAVDDSLVDRSVIERLLKISSCKVTSVDSGRRALQILGLDEEKSSVGVDGLKVNLIITDYWMPGMTGYELLKKIKESSTFREIPVVIMSSENVVARIERCLEEGAEEFIVKPVKLSDVKRLKDYITREEGDGEEEKGTHKRKFQYTSDDPSSSSSSSSSLEPPSRRLRTIDGSDGSTL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00610 197 MobiDBLite consensus disorder prediction 146 165 - -
Eupl11g00610 197 MobiDBLite consensus disorder prediction 146 197 - -
Eupl11g00610 197 Gene3D - 17 192 - -
Eupl11g00610 197 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Eupl11g00610 197 MobiDBLite consensus disorder prediction 166 197 - -
Eupl11g00610 197 SUPERFAMILY CheY-like 16 140 IPR011006 -
Eupl11g00610 197 SMART REC_2 17 144 IPR001789 GO:0000160
Eupl11g00610 197 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 170 IPR045279 GO:0009736
Eupl11g00610 197 Pfam Response regulator receiver domain 19 137 IPR001789 GO:0000160
Eupl11g00610 197 CDD REC_typeA_ARR 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00610 Eupl-Chr11 7776463 7778231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00610 12 197 Response Regulator Gene Family AT1G59940 61.376 7.88e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl11g00610 Response_reg 5.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00610 K14492 - vvi:100263979 249.21