Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00598 ATGTCTGATCTCGACGTCGAGGTTCCTACTACTTTTGATCCATTCGCTGAGGCAAATGCAGAGGACTCTAGTGCTGGGTCCAAGGAATATGTGCATGTGCGCATACAGCAGCGGAATGGTAGGAAAAGCCTGACCACCGTACAGGGGTTGAAGAAAGAATTCAGCTACAACAAGATTTTGAAGGATCTCAAGAAGGAATTCTGCTGCAATGGTACCGTTGTTCAGGACCCTGAGCTGGGCCAGGTCATTCAACTTCAAGGTGATCAGCGCAAGAATGTCTCCACTTTCCTTGTTCAGGTACACTGCTCCCCTTTACTACTACTACCACTCCTGTTGAACCAGCTCTTGTTCATTCCCATCGACCTCTATCTTTTGTTCGTTCCTGCTGATATTTCTTGCTTTTTTTCTTCGTCAGGCTGGCATTGTGAAGAAGGAACACATTAA 444 0.464 MSDLDVEVPTTFDPFAEANAEDSSAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQVHCSPLLLLPLLLNQLLFIPIDLYLLFVPADISCFFSSSGWHCEEGTH* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00598 147 FunFam Eukaryotic translation initiation factor SUI1 2 105 - -
Eupl11g00598 147 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 6 99 - -
Eupl11g00598 147 SUPERFAMILY eIF1-like 4 101 IPR036877 GO:0003743|GO:0006413
Eupl11g00598 147 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Eupl11g00598 147 Gene3D - 1 105 - -
Eupl11g00598 147 NCBIfam translation initiation factor SUI1 5 100 IPR005874 GO:0003743
Eupl11g00598 147 Pfam Translation initiation factor SUI1 28 99 IPR001950 GO:0003743|GO:0006413
Eupl11g00598 147 CDD eIF1_SUI1 29 101 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00598 Eupl-Chr11 7627601 7633887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00598 1 100 Eukaryotic Initiation Factors Gene Family AT1G54290 88.000 9.39e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00598 K03113 - nnu:104585667 194.897