Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00590 ATGGGAAAAAATGTCCTACAACAAGGTGTTGTTTCCTCTAATCTTCCTTCTCCCAGATGCAATGGAGATGATGGCTTGTTCATTGAAGAGAAAAAGCTCAGACTATTTGGCTTCGAGGTGTATCCCAATATGAATGATGGGAGGTGTTCGAGAGGGTCTGAAGAAGGAGATGAAAGTGTGAATTCCTCAAACACAGACTTGTCTGGGAGGGAGAATCCTGTTAAATACACCAGTCAAGCAAGCGAGCTGGAACACAAGAAGTATGAATGCCCATTTTGTTTCAAGGAGTTTGCAAACTCGCAGGCGTTGGGGGGTCATCAAAATGCCCATAAAAAGGAGAGGGTGAAGAAGAAAAGATTGCAGCTTCAAGCAAGGAAGGCAAGCTTCAATTGTTACCTTAAATCTTTCCAAGGTCTCCATGGTTTCAATTACTATGGCTCCTTTCATTGGAATTATAAACCTGCTTCCTATGTTCCAGAGTTCACTCTCTTTGAAGAGTCTCAGATTAGTTTCAACTCCTATGATCATAATGCATACAAGAATGGGCCCCTTGTCTCGAAACCGTTCTCTCTACCTCCTCATGTCCCAATCCAGCAACACACCTGTAAATTTAACCTTGTTCAAATCGACAGGTCCCATGGGAACAGACCCATCATCATTAAGCCTTCCCCTTTGCCTGTTCCTAGGCAAGGCTATGGAAGTTTGGATCTCCAGTTACGTCTTACCGGATCATCAAACATCTGCAGTTCCTCTAGAAGTAACGTATAA 768 0.4323 MGKNVLQQGVVSSNLPSPRCNGDDGLFIEEKKLRLFGFEVYPNMNDGRCSRGSEEGDESVNSSNTDLSGRENPVKYTSQASELEHKKYECPFCFKEFANSQALGGHQNAHKKERVKKKRLQLQARKASFNCYLKSFQGLHGFNYYGSFHWNYKPASYVPEFTLFEESQISFNSYDHNAYKNGPLVSKPFSLPPHVPIQQHTCKFNLVQIDRSHGNRPIIIKPSPLPVPRQGYGSLDLQLRLTGSSNICSSSRSNV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00590 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Eupl11g00590 255 SUPERFAMILY beta-beta-alpha zinc fingers 85 115 IPR036236 -
Eupl11g00590 255 MobiDBLite consensus disorder prediction 56 73 - -
Eupl11g00590 255 Gene3D Classic Zinc Finger 63 136 - -
Eupl11g00590 255 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Eupl11g00590 255 PANTHER ZINC FINGER PROTEIN 5 29 244 IPR044299 GO:0010090
Eupl11g00590 255 MobiDBLite consensus disorder prediction 48 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00590 Eupl-Chr11 7491858 7492625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00590 29 129 C2H2 Transcription Factor Family AT5G06650 34.653 6.63e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00590 - - psom:113331217 276.559