Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00589 ATGCCGGGTCACGGCTTTTCCTCGAAATCGGAGAAGAATGAGGCCGGGAAGCAGCAGCGGAGAGATCCGTACGAGGTTCTCGGCGTCTCTCGGAACTCAACAGATCAGGAAATTAAGAGCGCTTACCGAAAAATGGCTCTCAAGTACCATCCCGACAAAAATGCAAATGATCCTAAAGCAGCTGATATGTTTAAGGAGGCCACATTTTCCTATAACATTCTGTCTGATCCAGATAAACGGCGTCAGTATGACACAGCTGGTTTTGAGGCTATTGAATCCGAAAGCCAAGAATTGGAGGTAGATCTTTCAAGTTTGGGAGCTGTGAACACCATGTTCGCTGCACTTTTTAGTAAACTTGGAGTGCCGATTAAGACCACAGTTTCAGCAACGGTCTTGGAGGAGGCACTGAACGGAGGGGTAATCATTCGCCCACTTCATCTGGGACAACCTCTTTTTAAGAAGGTTGAGAAACAATGTGCTCACTTCTATGCTGTAACAATAACAGAACAGGAAGCACAAGCAGGGATTGTGTGTCGGGTGCATTCACCAGACAAAAGCAAATTCAAGCTGTTATACTTCGAGCAGGAAGAGAATGGTGGATTAAGCCTTGCATTACAGGAGGACAGTGCAAAAACAGGAAAAGTTACTTCTGCTGGGATGTACTTTCTTCGTTTCCCTGTTTACCGGTTGGATCAAAGCGTCATTTCGATGGCAGCTGCAAAGGATCCTGATGCTGCCTTTTTCAAAAAATTGGACGGATTTCAGCCATGTGAAATAACTGAGCTAAAAGGAGGCACCCATATATTTGCTGTTTATGGTGACAACTTTTTCAAAAGTGCAAGCTACACAATAGAAGCTCTTTGTGCTGCACCCTTTTCAGAAGAAAAGGAAAATCTCAGGGCCGTGGAAGCTCAAATTTTAACTAAGAGGGTGGAACTCTCTAAGTTTGAGACAGAGTACAGAGAGGTCCTGTCGCAATTCACAGAGATGACCAGTAGATATGCACAAGAAATGCAGGCTATTGATGAGCTACTTAAGCAAAGGAATGCAATTCATGCTTCTTACTCTACTGCTCCGCCCCTGAAGCGAAGTTCAAGTAGTAGCAAGATCAGAGGTTCTTTCAAGGAGTCCAAAGGGGAAGAAGAGCACCAAGCAAAAGATACGAAGCCTATGTCAAGGGATAGGCCAAAGAAGAAGAAATGGTACAATATCCACTTGAAGGTAGACAAGAGGAAGCCTTGCTGA 1245 0.4466 MPGHGFSSKSEKNEAGKQQRRDPYEVLGVSRNSTDQEIKSAYRKMALKYHPDKNANDPKAADMFKEATFSYNILSDPDKRRQYDTAGFEAIESESQELEVDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGGVIIRPLHLGQPLFKKVEKQCAHFYAVTITEQEAQAGIVCRVHSPDKSKFKLLYFEQEENGGLSLALQEDSAKTGKVTSAGMYFLRFPVYRLDQSVISMAAAKDPDAAFFKKLDGFQPCEITELKGGTHIFAVYGDNFFKSASYTIEALCAAPFSEEKENLRAVEAQILTKRVELSKFETEYREVLSQFTEMTSRYAQEMQAIDELLKQRNAIHASYSTAPPLKRSSSSSKIRGSFKESKGEEEHQAKDTKPMSRDRPKKKKWYNIHLKVDKRKPC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00589 414 CDD DnaJ 22 76 IPR001623 -
Eupl11g00589 414 PRINTS DnaJ domain signature 24 42 IPR001623 -
Eupl11g00589 414 PRINTS DnaJ domain signature 42 57 IPR001623 -
Eupl11g00589 414 PRINTS DnaJ domain signature 59 79 IPR001623 -
Eupl11g00589 414 PRINTS DnaJ domain signature 79 98 IPR001623 -
Eupl11g00589 414 FunFam Chaperone protein dnaJ 16 6 104 - -
Eupl11g00589 414 SUPERFAMILY Chaperone J-domain 19 91 IPR036869 -
Eupl11g00589 414 SMART dnaj_3 21 79 IPR001623 -
Eupl11g00589 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 8 413 - -
Eupl11g00589 414 MobiDBLite consensus disorder prediction 373 394 - -
Eupl11g00589 414 MobiDBLite consensus disorder prediction 355 402 - -
Eupl11g00589 414 Gene3D DnaJ domain 5 106 IPR036869 -
Eupl11g00589 414 Pfam DnaJ domain 22 84 IPR001623 -
Eupl11g00589 414 MobiDBLite consensus disorder prediction 355 372 - -
Eupl11g00589 414 MobiDBLite consensus disorder prediction 1 30 - -
Eupl11g00589 414 ProSitePatterns Nt-dnaJ domain signature. 64 83 IPR018253 -
Eupl11g00589 414 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00589 Eupl-Chr11 7476945 7487309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00589 15 85 C2H2 Transcription Factor Family AT1G74250 39.474 8.54e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00589 - - nnu:104595757 743.806