Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00575 ATGTCTTTCTCCTGCTCCGATTGCTTCTCCGACCTCCTCTGCGGTGAGGATGCCGGAATCTTGGCCGATGAATTACCGGAATACTCACTGGATCTTGAATTTCCGGCTGATATTGAGGAGTCGATAGCCGGATTCGTTGAAGAAGAAGGAGAGTACTCGCCGGGATTTGATTATCCTGCGAAGTTCCAGTCTCAATCGCTCGACGCTTCAGCTCGAAAGGAGTCAGTCGCATGGATTCTCAAGGTGCATGCGTTCTACCGTTTCCAGCCTTTAACGGCGTATCTTTCCGTTAACTACATGGATAGGTTCCTCGCTTCTCATCGTTTGCCGCAAGTGAATGGGTGGCCATTACAGCTCTTATCAGTTGCTTGCTTATCATTGGCTGCAAAGATGGAGGAACCCCTAGTTCCTTCTCTTTTGGATTTCCAGGTCGAGGGCGCGAAATTCATCTTCGAACCACGGACGATTCGTAGAATGGAGTTTCTTGTCCTCAATGCCTTAGACTGGAGACTACGATCGATAACACCATTCAACTTCATTGATTTCTTCGCATACAAAGTCGATTCAACTGGGACTTTTATTGGTTTCCTTGTCTCACGAGCAACGCAAATTATTCTAGCTATCATCAGAGAGATTAGTTTCCTAGATTACTACTGGCCATCATCATTGGCTGCCGCGGCCATACTTTGTGCAGCCAATGAAATCCCAAATCTATCTCTTGTTAATCCTGGAAATGCTGTAGCATGGTGCCATGGACTAAGCAAAGATGGAATTATAAGTTGCCACCAGTTAATGCAAGAAGTTGTGGTTGACAATCGCCAAAGAAAACCACCAAAAGTTTTACCACAGCTTAGAGTAATGACTCGGGCCGGAATCAGCTTTGCTGACTCATCTTCATCTTCGTCTTCGTCATCCGACAAGAGGAGGAAACTAAACAACTCTTTATGGGAGGATGATGATAAGGACAAACTCTAA 975 0.4564 MSFSCSDCFSDLLCGEDAGILADELPEYSLDLEFPADIEESIAGFVEEEGEYSPGFDYPAKFQSQSLDASARKESVAWILKVHAFYRFQPLTAYLSVNYMDRFLASHRLPQVNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQVEGAKFIFEPRTIRRMEFLVLNALDWRLRSITPFNFIDFFAYKVDSTGTFIGFLVSRATQIILAIIREISFLDYYWPSSLAAAAILCAANEIPNLSLVNPGNAVAWCHGLSKDGIISCHQLMQEVVVDNRQRKPPKVLPQLRVMTRAGISFADSSSSSSSSSDKRRKLNNSLWEDDDKDKL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00575 324 Gene3D - 46 236 - -
Eupl11g00575 324 SMART Cyclin_C_2 174 304 IPR004367 -
Eupl11g00575 324 MobiDBLite consensus disorder prediction 293 309 - -
Eupl11g00575 324 MobiDBLite consensus disorder prediction 293 324 - -
Eupl11g00575 324 PANTHER CYCLINS 57 271 IPR039361 -
Eupl11g00575 324 SUPERFAMILY Cyclin-like 36 171 IPR036915 -
Eupl11g00575 324 SMART cyclin_7 77 165 IPR013763 -
Eupl11g00575 324 FunFam D2/4-type cyclin 55 172 - -
Eupl11g00575 324 CDD CYCLIN_AtCycD-like_rpt1 71 169 - -
Eupl11g00575 324 Gene3D - 55 172 - -
Eupl11g00575 324 ProSitePatterns Cyclins signature. 72 103 IPR006671 -
Eupl11g00575 324 MobiDBLite consensus disorder prediction 310 324 - -
Eupl11g00575 324 SUPERFAMILY Cyclin-like 156 279 IPR036915 -
Eupl11g00575 324 Pfam Cyclin, N-terminal domain 45 171 IPR006671 -
Eupl11g00575 324 Pfam Cyclin, C-terminal domain 174 282 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00575 Eupl-Chr11 7263599 7267116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00575 11 320 Core Cell Cycle Gene Families AT1G70210 57.778 4.78e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00575 K18810 - nnu:104595600 483.026