Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00569 ATGCATGCGGCAGTGCAGTCAGGAGGGCGTTCTCCAAAGCCATTGAATGGTCCGACATCAACACCACAGTTAAAGCCTGGTTCAGATAGCTTACAGAATAGTGCCACCTCATTTCCTTCTCAGGTCAAGGGAAAGAAAAGGGAACGCGGTGATCAGGGCTCTGAGCCCATTAAACGAGAACGCTCTTTGAAGACAGATGATGGAGATTCTGGTCATTTTAGACCGGAAAGCATGTTGAAATCTGAGATTGCTAAAATTACAGACAAAGGAGGGCTTGTAGACTATGAAGGAGTTGAGAAGCTGGTGCAGCTCATGCAACCTGACAGAGCTGAGAAGAAAATAAACTTGGCTGGCCGAATAATGCTTGCGGATGTGATAACAGCCACAGAAAAGAATGATTGCCTTGGGCGATTTGTGCATCTCGGGGGTTTGTCTGTATTGGATGAGTGGCTCCAGGAGGTGCATAAAGGGAAGATTGGTGATGGGAGTAGCCCAAAGGAAAGTGATAAATCTGCTGAGGAATTTCTTTTGGCTTTGCTTCGTGCACTTGATAAGTTGCCTGTAAATCTTCCTGCCCTACAGGCTTGTAATGCTGGTAAGTCTGTGAATCATTTGCGTAGTCATAAAAATTTGGAAATCCAGAAGAAAGCTAGGAGTTTAGTTGACACTTGGAAGAAACGTGTTGAAGCAGAAATGAAGATTATTGATGCGAAGTCTGGGTCAAGCCAGGCTGTTTCATGGTCTAGCAAGCCTGGTTTTTCTGAAGTTTCTCCTGGAGGAAACAGACGTACTGGAGGATCCTCTGAGGTTCCCATGAAGAGCTCCATTACACAGCCTCCTGCATCTAAAACAGCACCAGTTAAGCTTGGCCACTTAGATGCCACTGCCAAGTCGGCATCAGCATCCCCTGGGTCTATGAAGTTATCAGCATCATTGCCGGCATCAGTGGTTAGTTCAAAGGATTCACATTGCAAAATGACAGTTAGCAGTGGAACTTCAGATCTGCCTCTAACAACAATAAGGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAGAACAATAGTCAGTCTTGTTCAAGTGATCATGCCAAAACTGTGGTTTCTTCGTGGAAGGAGGATGCGAGGAGCTCCACTGCTGGTTCAATAAATGTGAATAAGACTTCTAGTAGCGCCTCTCGCCATCGCAAATCAAGCAATGGTTTTCTGGGGTCACCGGTCTCTGGAGTTCAAAAAGAAACTACTTTGGGCAAGTGCAGCTCTGTGAACAGGAATGCCGCATCTGAAAAAGTTTCACAATCTGGATTAACATGTGAAAGGACACTTGATGTGCCCCTTGTTGATCATGGAAACAGTCACAGATTGATTGTCAGGCTTCCAAATCCTGGCCGTAGTCCTGCACGAAGTGCTAGTGGAGGTTCTTTTGATGATCCCTCTGTCATGGTTAGTAGAGCTTCTTCTCCCGGACTTCCTGATAGGAATGATCACTGTGACCGGAAAGTAAAGGGAAAGAGTGATGCTTGTCGAGCTAAGATTGCTGCAGATGTAAATACAGAATCATGGCAGAGCAATGATGTGAAAGATGGATTTGCTGGGTCTGATGAAGGTGATGGGTCACCTGCTGCTGTAGTTGAAGAAGAACGTGGTAGGAATGGTGATGAGATAGGGAAAACACTGGAATCATCGAAAGCTACCTGCACATCATCAGGAAATGACAAGGGAGTTTTCTTGAGTGAACCAAAGACGGGTAAATCTTACGAGGCTTCTTTCAGCTCCATAAATGCCTTGATTGAAAGCTGTGTCAAGTACTCTGAAGCTAATGCATCTATGTCAGCTGGGGATGATCTCGGGATGAATCTGCTTGCCAGTGTGGCTGCTGGAGAAATGTCCAAATCTGACATGGTTTCGCCTACTGCTTCTCCTGGGAGAAGCTCACCTCTACCAGAGGATTCTTATATGGGCAATGATGCTAAGTTGAGCTTATCACGTGAAGATATTGCGGCTCAAAGTCGAGGCCAACCGGATGATGGTGCAGATGGTGAAACTGAGAAGCAGGGTACTATTGTTGGTCCTCTGCGGGTTAAGGATGGATTACAACATACACCAACCAATTTTTCCGGAGACAGTAAAACCGCTTCATCCTTCTCTGAAGAGAAATCAACAGGGGAGCATAATGAGCAATTTCATGTTTCCAGTATGAATTTGCAACAAACTGCCAATCCATGCTTAAGGTCTGATGGGAAACCTGATGAAACAGCAACTGCTTCTGTGGCTGTGTCCTCTGCAGACACTAGAGAAGAGGGTACAAAGGGTGAAGGAGCCAACCAACTTCGTGAGAAAAGGAAGACAGGAGTTACTAGCTGGAATGATGATGACATCCCAGATTTTAAACCGAAGGTTAAGAGTGCCTTGTTGGATGAAAAGAAGGTTAACCATGCAAATGAAAAGATTACGGAGAGTAGTACGACCGCCACATCTGACGTCGTTTGCAGTTCTGTGGGTGATGCATGTGATATTGACAATCCAACTTCAAGTGTAAAAGTTGAGAAGGAAGCTGTTGAAGAATCACCATCGTGCCCACCTTTGGAAATGGATAGCGAGAACAAGAATCTTGTGCATGAAGAGTTGAGTGGTGGCCTCTCAACAGAGCAGAAGCTACCTCCTGTTATGGATCGCAATGAGGCTGTAGAGGGAAGTGCTGAGGATGTTGTGCTTCCTTCTGGTTCTGGTAATGTTTTGGGTCCAGACAATGCTGATGAGTTCAAGGCTGAAAAGGCTGATGGCATGGAGGCAAGGACTCATGTTGAGCAGAGTGATAATCAAAGAATGGAGCGGCCGAGTACAATTCCTTCCCCTCTTGATGATCGTGTTGCAGCTGGTGTAGGTTCAGTAGTTTTAGATCACAATGACGGCATTGAGGAGAACTCAGAAAGAAAAGAGGTCCTTGAGCACCATTCTGGTGGATCAGTGCCTCATGAAGAGTCACTCTTAATTCCCGTGCAAGAAACTGAGCAGTCTGTGAAATCTTCTGGATCTAAGTTGTCTGGTGTTGAAGCAGACGAATCAGAGGAATGTGCGTCCAGTGCAGAAGCTTCTACTTTGTCTATTGCAGCAGGGTCAGAGATGGCTGCAAAGCTGGACTTTGATTTGAATGAAGGATTCCCCGTGGATGAAGGGAACCAAGGCAATCCATTTACCTCAGCGGCTCCTGGATGTTCATCTGCTGTTCTTCTCCCTAGCCCTTTGCCATTTCCTCTTTCTTCGATGTCAAGCAGTCTGCCTTCGTCAATTACAGTGGCTGCCGCTGCGAAAGGGCCTTTCGTTCCTCCGAAAATCTATTGA 3339 0.4603 MHAAVQSGGRSPKPLNGPTSTPQLKPGSDSLQNSATSFPSQVKGKKRERGDQGSEPIKRERSLKTDDGDSGHFRPESMLKSEIAKITDKGGLVDYEGVEKLVQLMQPDRAEKKINLAGRIMLADVITATEKNDCLGRFVHLGGLSVLDEWLQEVHKGKIGDGSSPKESDKSAEEFLLALLRALDKLPVNLPALQACNAGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMKIIDAKSGSSQAVSWSSKPGFSEVSPGGNRRTGGSSEVPMKSSITQPPASKTAPVKLGHLDATAKSASASPGSMKLSASLPASVVSSKDSHCKMTVSSGTSDLPLTTIREERSSSSSQSQNNSQSCSSDHAKTVVSSWKEDARSSTAGSINVNKTSSSASRHRKSSNGFLGSPVSGVQKETTLGKCSSVNRNAASEKVSQSGLTCERTLDVPLVDHGNSHRLIVRLPNPGRSPARSASGGSFDDPSVMVSRASSPGLPDRNDHCDRKVKGKSDACRAKIAADVNTESWQSNDVKDGFAGSDEGDGSPAAVVEEERGRNGDEIGKTLESSKATCTSSGNDKGVFLSEPKTGKSYEASFSSINALIESCVKYSEANASMSAGDDLGMNLLASVAAGEMSKSDMVSPTASPGRSSPLPEDSYMGNDAKLSLSREDIAAQSRGQPDDGADGETEKQGTIVGPLRVKDGLQHTPTNFSGDSKTASSFSEEKSTGEHNEQFHVSSMNLQQTANPCLRSDGKPDETATASVAVSSADTREEGTKGEGANQLREKRKTGVTSWNDDDIPDFKPKVKSALLDEKKVNHANEKITESSTTATSDVVCSSVGDACDIDNPTSSVKVEKEAVEESPSCPPLEMDSENKNLVHEELSGGLSTEQKLPPVMDRNEAVEGSAEDVVLPSGSGNVLGPDNADEFKAEKADGMEARTHVEQSDNQRMERPSTIPSPLDDRVAAGVGSVVLDHNDGIEENSERKEVLEHHSGGSVPHEESLLIPVQETEQSVKSSGSKLSGVEADESEECASSAEASTLSIAAGSEMAAKLDFDLNEGFPVDEGNQGNPFTSAAPGCSSAVLLPSPLPFPLSSMSSSLPSSITVAAAAKGPFVPPKIY* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 42 76 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 698 715 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 319 409 - -
Eupl11g00569 1112 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1110 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 456 500 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 917 940 - -
Eupl11g00569 1112 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 96 232 IPR035441 -
Eupl11g00569 1112 CDD TFIIS_I 153 229 - -
Eupl11g00569 1112 ProSiteProfiles TFIIS N-terminal domain profile. 145 231 IPR017923 -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 628 795 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 1 76 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 241 287 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 998 1015 - -
Eupl11g00569 1112 SMART TFS2_5 151 230 IPR003617 GO:0005634
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 241 282 - -
Eupl11g00569 1112 Pfam TFIIS helical bundle-like domain 179 228 IPR017923 -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 834 1027 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 12 41 - -
Eupl11g00569 1112 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 134 240 IPR035441 -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 764 795 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 725 742 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 521 540 - -
Eupl11g00569 1112 MobiDBLite consensus disorder prediction 969 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00569 Eupl-Chr11 7187143 7190481 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Eupl11g00569 Med26 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00569 - - ming:122077207 1326.23