Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00566 ATGTCACAAGGTTATGCAGTCGAGCTTTACTTCGATCCTGCGCTGGAAAACCAGGTCTTGAAGGCATGGAACGTCCTTGCTCGTCGTCAGATCAGCACCCAGCTTATCGAGATCGAATCTCGACCACATATCACCCTTCTCTCTAGCCCTCTTCTCGACCCCACGAAACTCCAAAACGTGATAAAGAATTTTGCTTCCAAGCAGGAACCTTTGGTTCTAACTCTCTCTACCATAGGTAGCTTCCCTAATGAAGGAAACGTTCTTTTTCTTGCTCCTACGCCTTCGTCGTCGCTCTTTCAATTCCACTCTCAATTGTGTGATGCACTTAAGAAGGAAAGCGTCGAAATTGGTGAAGAGTACTGCCCGGACTCATGGATCCCTCACTGCACGGTCGCGCAAGAGGTCCCGAGGAATCGGATGGCCGAGGCTTTCTGTATTTTGCGGGATTTGAAGTTGCCCGTTAGTGGGTATGCGATGGATATTGGGTTGGTGGAGTTCTCGCCTGTTCGTGAGCTCTTCTCTTTTCCGCTTGGGAGTATATCGGAAGCATGA 552 0.4928 MSQGYAVELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLLSSPLLDPTKLQNVIKNFASKQEPLVLTLSTIGSFPNEGNVLFLAPTPSSSLFQFHSQLCDALKKESVEIGEEYCPDSWIPHCTVAQEVPRNRMAEAFCILRDLKLPVSGYAMDIGLVEFSPVRELFSFPLGSISEA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00566 183 SUPERFAMILY LigT-like 4 144 IPR009097 -
Eupl11g00566 183 Gene3D Cyclic phosphodiesterase 5 179 - -
Eupl11g00566 183 PANTHER - 1 179 - -
Eupl11g00566 183 Pfam 2'-5' RNA ligase superfamily 41 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00566 Eupl-Chr11 7168661 7176584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00566 1 183 Calmodulin-binding Proteins AT5G40190 71.585 4.93e-93 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00566 - - msin:131258258 323.168