Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00556 ATGTCACTAAGGCGACCGATATGTAACGAAATGTCTGGTGGGAATTTACGGAGAAGATCAAGGAGACGGATGGTTCGTGGGTCGGTTCGGATGAAGGTCAGGATGCTCCAGAGGCTCGTGCCGGGTGGACGAGGGTTGCAGGTCGATCGCCTTTTCCTTCAGACGGCTGATTACATCTTGCATTTGAGGTTGAAAGTTAATGTCCTTCAAGCGCTTTCCAAGTTGTACAAACCATGA 237 0.4979 MSLRRPICNEMSGGNLRRRSRRRMVRGSVRMKVRMLQRLVPGGRGLQVDRLFLQTADYILHLRLKVNVLQALSKLYKP* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00556 78 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 18 76 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00556 Eupl-Chr11 7032044 7032542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00556 28 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 40.816 1.52e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00556 - - nnu:104595309 93.9745