Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00554 ATGGATCGAATTGCCACCTGGGTATTATTTGTTTCGATCTTCCTCCTCCTCCACAGAACAAATTCAGAAGATGAAGAGGTGAAGCGCTCGCTCATCAAATTCCTTGGGCAATTATCTCCCAACAATGGCCAAATAGATCCCAATTTGGGTTGGAACATGAGCTCTGATCCTTGCACCGATCGTTGGAAGGGTGTGAGCTGTGATACCCGGTTGACTTCCGTGAAGAAAATCGTCCTTGATGATTTTGGCCTCATCGGAGCTCTCGATGCCAGTTCACTCTGCACAGTGAAGTCTCTTGCCGTGCTGAGCCTCAACAACAACAGTATTGATGGTGAAATTCCCGAAGAGATAGGAAACTGTAAGCAACTGACCCACTTTTATGTAAGCAGGAACCGATTCAGCGGCAACCTTCCTGATTCCCTCTCCCGCTTAAATAATTTGAAGAGGCTCGATATCTCCAATAATGATTTCTCAGGTGGATTGCCGGATTTGTCACGGATATCGGGTTTGATATCATTCCTTGCTGAAAACAATCTGCTTAGTGGCAAGATACCCGAATTCGATTTTTCCAACCTTCAGCTTTTCAATGTTTCCTTCAACAATTTCAGTGGACCCATCCCTGACCTCAAAGGCCGTTTCAATGAGAGCAGTGTCTTGGGTAATCCTGGATTGTGTGGACCACCACTGATTAATGCATGCCCCCCATCCCCATCCCCATCCCCATCCCCACCCCCAAAAAAGAAGTCAAAAGGTCTTTCAAGCGGGCAGGTTCTCATGTTCTCAGGCTATATTCTTCTAGGTCTGGTTTTCGTCGCCTTTGTTGCTTTCAAGTTAATCAATAGAAACAAGACCAAAGAGGAGAAGGTTGATGCTGTTAAGAAGGGAGTAGCTGTGGATAATAGTAGCAGCAAACCTAGTGGTGGTACTGCTTCAAGTGAGAACAAGACCGATGCGAGTAGATCGGAGTATTCGATAACGTCTGCTGAAAGTGCAATGATGTCATCGTCGCTGGTCCTTCTTACTAGTCCGGCAGTGAAGGAGCTGAGATTTGAGGATCTACTCAAAGCTCCGGCTGAGTTGCTCGGGAGAGGAAGGCATGGTAGCCTCTATAAGGTTATATTCGAGGATGGGATGACTCTGGCTGTGAAAAGGATAAAAGATTGGACTATTTCGTGTGAAGACTTCAAGGTGAGGATGCAGAAGATAGACCAAGTGAAGCACCCAAATGTATTGTCTGCTGTTGCGTTTTATTGTTCTAATCGAGAGAAGCTCGTAGTTTATGAATACCAGCAGAATGGAAGTCTCTTCAAGCTTCTCCATGGAACCCGAAATGGTCAAACATTTGATTGGGATAGCAGGCTAAGTGTTGCAGCTAGCATTGCTGAGGCTTTGATCTTCATGCACGAAAAGCTCCATGAAGATGGGATTGCTCATGGGAACCTAAAATCCTCCAACATTTTGTTCACCCAGAACAAGGATCCATGCATTAGCGAATACGGTCTAATGGTGGTGGACAACCAAGACCAATCTTCTCTTGCCCATGGATACAAAACCATGGATCACAGCAGGGACCACAATAGCACCTTCCAGATAGACATGTATGGCTTTGGTGTCATTCTCCTTGAGCTACTAACTGGGAAGCTGGTGCAGAACAATGGGTCTGAATTGGCTAGATGGGTACACTCGGTGCTTAGAGAAGAATGGACCGTAGAAGTGTTTGACAAGGCCCTGATTAGAGAAGGTGCGAGTGAAGAGAGGATGGTGAATTTGCTACAGGTAGCACTAAAATGCATAAATCCTTCTCCAGAGGCGAGGCCAAGCATGAATCAGGTTGCTGTCATGATCAACAACATAAAGGAGGAAGAAGAGAGGTCCATAGTCTCTGAACCATGA 1893 0.458 MDRIATWVLFVSIFLLLHRTNSEDEEVKRSLIKFLGQLSPNNGQIDPNLGWNMSSDPCTDRWKGVSCDTRLTSVKKIVLDDFGLIGALDASSLCTVKSLAVLSLNNNSIDGEIPEEIGNCKQLTHFYVSRNRFSGNLPDSLSRLNNLKRLDISNNDFSGGLPDLSRISGLISFLAENNLLSGKIPEFDFSNLQLFNVSFNNFSGPIPDLKGRFNESSVLGNPGLCGPPLINACPPSPSPSPSPPPKKKSKGLSSGQVLMFSGYILLGLVFVAFVAFKLINRNKTKEEKVDAVKKGVAVDNSSSKPSGGTASSENKTDASRSEYSITSAESAMMSSSLVLLTSPAVKELRFEDLLKAPAELLGRGRHGSLYKVIFEDGMTLAVKRIKDWTISCEDFKVRMQKIDQVKHPNVLSAVAFYCSNREKLVVYEYQQNGSLFKLLHGTRNGQTFDWDSRLSVAASIAEALIFMHEKLHEDGIAHGNLKSSNILFTQNKDPCISEYGLMVVDNQDQSSLAHGYKTMDHSRDHNSTFQIDMYGFGVILLELLTGKLVQNNGSELARWVHSVLREEWTVEVFDKALIREGASEERMVNLLQVALKCINPSPEARPSMNQVAVMINNIKEEEERSIVSEP* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00554 630 Gene3D Ribonuclease Inhibitor 25 187 IPR032675 -
Eupl11g00554 630 Pfam Protein kinase domain 359 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00554 630 PANTHER OS05G0588300 PROTEIN 8 620 - -
Eupl11g00554 630 Gene3D Phosphorylase Kinase; domain 1 320 429 - -
Eupl11g00554 630 ProSiteProfiles Protein kinase domain profile. 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00554 630 SUPERFAMILY L domain-like 50 229 - -
Eupl11g00554 630 FunFam Nuclear pore complex protein NUP107 24 186 - -
Eupl11g00554 630 MobiDBLite consensus disorder prediction 299 323 - -
Eupl11g00554 630 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Eupl11g00554 630 MobiDBLite consensus disorder prediction 230 246 - -
Eupl11g00554 630 MobiDBLite consensus disorder prediction 230 251 - -
Eupl11g00554 630 Gene3D Transferase(Phosphotransferase) domain 1 431 629 - -
Eupl11g00554 630 SUPERFAMILY Protein kinase-like (PK-like) 358 614 IPR011009 -
Eupl11g00554 630 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Eupl11g00554 630 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Eupl11g00554 630 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Eupl11g00554 630 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00554 Eupl-Chr11 7007342 7010251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00554 51 619 Receptor kinase-like Gene Family AT1G68400 35.516 9.27e-101 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl11g00554 Pkinase 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00554 - - vvi:100255249 815.453