Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00549 ATGGTGTCAAGATCATGCACGGACTTTTTAGACATGGCTTCCGGAGACCTACTGGATTTCCCTACGACTCCTAGAACCCTTCCACGTGTGATGACTGTTCCTGGAATTATATCTGACTTAGATGGTGACGGCAGTAATGATGGGGATTCAGATGTTCCTTCGACTGTATTCCGTGAGCGAAAAATTATAGTAGCAAATCTACTTCCGCTGCATGCTCAAAGAGATAAACAAACTGGTGGATGGCGCTTCAGTTTGGATGAGGATTCTCTCCTGTTACAAATGAAGGATGGATGGTCATCAGTAACTGAAGTTATTTATGTGGGCTCTCTGAAGGTTGATATAGATGCCAGCGAACAGGAAGAAGTGGCACAAAAACTGCTGGAGGATTTCAGTTGTGTGCCAACATTTCTACCTCCCGACCTTCAGAAAAAGTTTTACCATGGATTCTGTAAGCAGCAGTTGTGGCCTCTTTTCCATTATATGCTGCCCATTTGCCCAGACCATGGTGATCGCTTTGACCGGTCGCTTTGGCAGGCTTATGTTTCTGCAAATAAAATTTTTGCAGATAAGGTTATGGAGGTGATTAATCCCGAGGATGATTACGTCTGGGTCCATGATTATCATCTTATGGTTCTCCCTACTTTCTTAAGGAAGCGATTCAATCGAGTCAAGCTTGGATTCTTCCTCCACAGCCCTTTCCCCTCATCAGAAATCTACCGGACTCTGCCTGTCAGAGATGAAATTCTGAGGGCACTGCTTAATTCCGATCTAATCGGTTTTCATACATTTGATTATGCTCGACACTTCCTGTCTTGTTGCAGTAGGATGCTGGGCCTTGGCTACGAGTCTAAGCGGGGCTACATTGGACTTGAATACTTTGGTCGCACAGTATACTTTAAAATTCTGCCTGTAGGTGTTCATATGGGCCGGCTTGAGTCTGTATTAAATCTTCCCTCTACATTCATCAAAGTCAGAGAGATCCAAGAACAGTTCAAGGGAAAAAGGTTGATTCTGGGTGTAGATGACATGGACATTTTTAAAGGCATCAGTCTGAAGCTACTAGCAGTGGAGCAGCTTTTGCAGCAGCATTCTGAGCTGCAGGGCAAACTAGTCCTTGTTCAAATAGTGAATCCTGCAAGGAGCACAGGGAAAGATGTCCAAGAAGCAAAAAGGGAGACATACTTGACTGCCAGAAGGATCAACGAGATCTATGGTTCTCCAGGCTATGACCCGGTGATCCTGATTGACCGTCCTCTTCCTCTTTACGAGAAGATTGCATTTTATGCAGTGGCAGAATGTTGCATAGTAAATGCTGTGAGGGATGGGATGAACTTAATTCCATACAAGTACGTTGTGTGTAGGCAGGGAACTCCCGAGATGGATGACGCTATGGGTATCAGTGCGGGGTCCCCTCGCACAAGCATGCTTGTTGTCTCTGAGTTCATAGGTTGCTCACCATCTCTAAGTGGGGCAATCAGAGTCAACCCATGGGACATTGATGCTGTAGCCGAAGCCTTAAATTTGGCTATTACCATTTCCAACGCCGAAAAGCAGTTGCGGCACGAGAAGCACTATCGGTATGTCAGCTCTCATGACGTGGCTTACTGGGCCCGGAGCTTTGTGCAGGACTTGGAGAGAGCGTGCAAAGATCACTACAGTAATCGGTGCTGGGGCATCGGTTTGGGTCTGGGTTTCAGAGTTGTTTCTCTTTCACCAAATTTTAGGAAGTTGTCCATTGACCATATTGTCTCGGCCTACAAGAGAACGAATAGAAGGGCAATATTTCTGGACTACGATGGCACTATTGTTCCCCAAACTTCTATTAGCAAAATTCCTAGCCCAGAAGTTATCTCTGTTCTGAACAACCTTTGCAGTGATCCAAAGAACACTGTATTTATTGTTAGCGGTAGAGGGAGGAGTTCCCTGAGTGAGTGGTTTGCCCCTTGTGAGATGCTGGGAATAGCTGCTGAGCATGGGTATTTCATAAGGTGGAATAGGACCTCTGATTGGGAATCCAGTCAATTAGTTGCCAACTTTGAATGGAAAAGAATTGCAGAACCTGTGATGAGATTATACACAGAAACAACTGATGGGTCCTACATAGAAACCAAGGAGAGCGCCTTGGTATGGCAACATCAAGATGCAGACTCTGATTTTGGATCCTGCCAGGCCATGGAACTCTTGAATCATCTGGAAAATGTACTGGCAAATGAACCGGTAGTTGTTAAGAGGGGCCAGCATATTGTCGAAGTTAAGCTCCAGGGAATAAGTAAAGGGTTGGTTACAGAGAAGCTTCTCTCAACCATGGTTAGTAATGGGAAGCCGCCAGATTTTGTGATGTGCATAGGAGATGACAGATCCGATGAGGACATGTTTGAGAGTATATTGAGTGCAATCTTTAGTCCATTGTTGCCAGCAGTTCCGGAGATCTTTGCATGCACGGTCGGGCAAAAGCCAAGCAAGGCCAAGTATTACCTAGATGATACTGTTGATGTTGTGAAATTGCTTCAAGGCCTTGCTGCTGCTTCAAGTTTGAAGCCGAGATACAGTTCCCATATTCAGTTCTCTTTTGAAAGTGCTGCTTGA 2586 0.4528 MVSRSCTDFLDMASGDLLDFPTTPRTLPRVMTVPGIISDLDGDGSNDGDSDVPSTVFRERKIIVANLLPLHAQRDKQTGGWRFSLDEDSLLLQMKDGWSSVTEVIYVGSLKVDIDASEQEEVAQKLLEDFSCVPTFLPPDLQKKFYHGFCKQQLWPLFHYMLPICPDHGDRFDRSLWQAYVSANKIFADKVMEVINPEDDYVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLGYESKRGYIGLEYFGRTVYFKILPVGVHMGRLESVLNLPSTFIKVREIQEQFKGKRLILGVDDMDIFKGISLKLLAVEQLLQQHSELQGKLVLVQIVNPARSTGKDVQEAKRETYLTARRINEIYGSPGYDPVILIDRPLPLYEKIAFYAVAECCIVNAVRDGMNLIPYKYVVCRQGTPEMDDAMGISAGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITISNAEKQLRHEKHYRYVSSHDVAYWARSFVQDLERACKDHYSNRCWGIGLGLGFRVVSLSPNFRKLSIDHIVSAYKRTNRRAIFLDYDGTIVPQTSISKIPSPEVISVLNNLCSDPKNTVFIVSGRGRSSLSEWFAPCEMLGIAAEHGYFIRWNRTSDWESSQLVANFEWKRIAEPVMRLYTETTDGSYIETKESALVWQHQDADSDFGSCQAMELLNHLENVLANEPVVVKRGQHIVEVKLQGISKGLVTEKLLSTMVSNGKPPDFVMCIGDDRSDEDMFESILSAIFSPLLPAVPEIFACTVGQKPSKAKYYLDDTVDVVKLLQGLAAASSLKPRYSSHIQFSFESAA* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00549 861 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Eupl11g00549 861 Gene3D Glycogen Phosphorylase B; 315 529 - -
Eupl11g00549 861 Gene3D Glycogen Phosphorylase B; 50 314 - -
Eupl11g00549 861 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Eupl11g00549 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Eupl11g00549 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Eupl11g00549 861 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Eupl11g00549 861 SUPERFAMILY HAD-like 592 840 IPR036412 -
Eupl11g00549 861 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Eupl11g00549 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Eupl11g00549 861 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
Eupl11g00549 861 Gene3D - 591 709 IPR023214 -
Eupl11g00549 861 Gene3D - 721 853 IPR023214 -
Eupl11g00549 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 852 - -
Eupl11g00549 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 841 IPR001830 GO:0003824|GO:0005992
Eupl11g00549 861 CDD HAD_TPP 593 834 - -
Eupl11g00549 861 NCBIfam trehalose-phosphatase 590 839 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00549 Eupl-Chr11 6841655 6847113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00549 1 859 Trehalose Biosynthesis Gene Families AT1G23870 74.913 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00549 K16055 - ming:122075209 1488.01