Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00544 ATGGCGAGTCTAAGAATTTCATCACTTCTCCCTCGATCCTTCTCTGCTTCGTGTCGTTCCCTAGGCAGAAATTCTACCTGGGGTAGAGGCATCTATAGGCTTAGCACCGCTGCTGCAACTGAAGAACCGATCACTCCACCTGTTCAAGTAAAACATACCCAACTTCTAATCAATGGTCAATTTGTTCATGCGGCGTCAGGAAAAACTTTTTCAACGTTGGACCCAAGGACAGGAGACCTAATTGCCCATGTTGCTGAAGGTGATGCAGAAGACGTGAACCGGGCTGTTGCCGCTGCTCGAAAGGCATTTGATGAAGGACCGTGGCCAAAGATGAGCTCTTATGAAAGATCACAGATAATTTACCGCTTCGCCGATTTGCTTGAAAAGAACATCGATGAAATTGCTGCACTTGAGGCATGGGACAGCGGGAAGCCTCATGAACAGTCTGCTAATATTGAACTACCAATGCTGATACGTCTATTTCGATATTATGCTGGTTGGGCGGACAAGATTCATGGTCTCATAGTTCCAGCTGATGGACCACACCACGTTCAAATCTTGCGTGAGCCAATTGGTGTTGTCGGGCAGATTATTCCATGGAATTTTCCTCTTCTCATGTTTGCTTGGAAGGTCGGGCCTGCATTAGCTTGTGGTAACACTATTGTTATCAAGAGTGCGGAGCAGACACCATTATCTGCCCTCTATGTGGGAAAGCTGTTCCTTGAGGCTGGGCTTCCTCCGGGCGTTCTAAATGTGCTTTCTGGGTTTGGTCCAACTGCTGGTGCAGCTCTTGCCAGTCATATGGATGTGGACAAGCTTGCTTTTACGGGATCAACTGATACAGGAAAGATTGTCCTTGAATTGGCTGCAAAAAGCAATCTGAAGCCAGTGACATTAGAGCTTGGAGGGAAATCTCCTTTCATTGTATGTGAGGATGCTGACGTTGATAAGGCTGTTGAGCTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGTACATTCGTACATGAACGTGTATATGATGAGTTTCTAGAGAAGGCAAAGGCACGTGCTATGAGACGTGTCGTTGGTGACCCCTTCAAGAAGGGCATTGAACAGGGTCCTCAGATTGATTTAGAGCAATTTGAGAAAATCATGAAGTACATAAGATCTGGTATCGAAAGTGGGGCTACCCTTGAATCTGGAGGCGAAAGATTTGGCACCAAAGGCTACTATATTCAGCCCACAGTCTTCTCAAATGTCCAGGATGGAATGCTGATAGCAAAGGATGAGATCTTTGGCCCTGTGCAGACCATTTTGAAATTCAAGGATCTTGATGAGGTGATAAAAAGAGCAAATGCCACTCGCTACGGGCTTGCTGCAGGAGTCTTCACCAAGAATATAGATACCGCCAACACCCTGATACGCGCATTGAGAGCTGGGACAGTATGGGTTAATTGTTTTGATGTTTTTGATGCGGCGATTCCTTTTGGTGGGTACAAGATGAGTGGGCAGGGCAGAGAAAAAGGAATCTACAGCCTTAAAAACTATTTACAAGTGAAGGCAGTTGTTACTCCCTTGAAGAATCCTGCATGGTTATAA 1602 0.46 MASLRISSLLPRSFSASCRSLGRNSTWGRGIYRLSTAAATEEPITPPVQVKHTQLLINGQFVHAASGKTFSTLDPRTGDLIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMSSYERSQIIYRFADLLEKNIDEIAALEAWDSGKPHEQSANIELPMLIRLFRYYAGWADKIHGLIVPADGPHHVQILREPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVIKSAEQTPLSALYVGKLFLEAGLPPGVLNVLSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKAKARAMRRVVGDPFKKGIEQGPQIDLEQFEKIMKYIRSGIESGATLESGGERFGTKGYYIQPTVFSNVQDGMLIAKDEIFGPVQTILKFKDLDEVIKRANATRYGLAAGVFTKNIDTANTLIRALRAGTVWVNCFDVFDAAIPFGGYKMSGQGREKGIYSLKNYLQVKAVVTPLKNPAWL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00544 533 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Eupl11g00544 533 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 57 315 - -
Eupl11g00544 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 57 521 IPR016162 GO:0016491
Eupl11g00544 533 CDD ALDH_F2BC 50 525 - -
Eupl11g00544 533 FunFam Aldehyde dehydrogenase, putative 495 521 - -
Eupl11g00544 533 FunFam Mitochondrial aldehyde dehydrogenase 2 305 494 - -
Eupl11g00544 533 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 299 306 IPR029510 GO:0016491
Eupl11g00544 533 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 38 523 - -
Eupl11g00544 533 Pfam Aldehyde dehydrogenase family 62 523 IPR015590 GO:0016491
Eupl11g00544 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 492 IPR016163 GO:0016620
Eupl11g00544 533 SUPERFAMILY ALDH-like 48 527 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00544 Eupl-Chr11 6752597 6777381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00544 1 533 Aldehyde Dehydrogenase Gene Family AT3G48000 78.625 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00544 K00128 - nnu:104593233 939.873