Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00542 ATGAATTGCTTGACTTCATTGAAGAATTTAGAAGAAGATGTTTTTGGTTGTGGAATTGAGAGCCTCACCAGTGGCGGCGGTGGTTGCTCTGACTTTTATGTTGCTGATGTTGTTAATAAATTGGGAAATGGATTGAGAGGCTTAGAGGAAGGCTGCAAGCTTTCGAGTTCTGGTGACGAATGTGATACCTGTTTGAGGAGATTTGCAGTGTTGGTGTCTTTAACGAGTAATAGGATTGAAGATATTAAATGGGCCCAGACAGTTTACAGATGTCTCGGAGAGCAAAGTCCCACCAGTGTGCAACCAGAAACTAACGGTACAAAGAAGAAGAAAATGAACACAGGTCTGTGGATTCTAATTGGAGGCCTCATAGGGATTCTAATAGTGCTAATTATCGCAGCATGGATCTTGTTGAAAAGACGGATTAAAAAAAAGTTCTCTGTGGAAAAAGATGTATCGAAGGAATTGCTACCTGAGGAACCTGGCAGTCATAAAATCCCCATTAAGGAGATTTATTCTGCCACAAACAATCTAAATGTATTGAACTTCATTGGCCAAGGCATAGCTGGAAAGGTGTATAAAGGTGTATTATCAAATGGTCGGCGTGTTGCGGTTAAGCACATTATCAACGAAGGATATGTGGAGACGTTTGTCAGGGAAGTTACAAGCCTATCGCATGTTAGACATCCAAACCTCGTGGCTCTGCTGGGATATTGTGAGGAAGAAGATGAGTGTTTCCTTGTTTACGAGCTGTGCCCCAATGGGAACCTTTCAGAGTGGCTATTTGGTAAAGACAAAGTCCTGTCGTGGATTCAAAGACTTGAGATCGCAATTGATAGTGCTCGGGGTCTTTGGTTTCTCCACACATATCCAGAAGGTTGCATTGTTCACCGTGATATCAAGCCAACCAACATTCTTCTCGGGACGACTTTTGAAGCCAAACTCTCAGACTTTGGTTTGTCCAAGGTTATTGATGTGGGTCAATCCTACGTGAGCTCGGAAGTGAGAGGAACCTTTGGTTATGTTGACCCTGAATACCAACGGAACCACCGTGTGAATTCCTCTGGCGATGTATACAGTTTTGGAATTGTCCTCTTACAAATCCTCTCTGGGAAAAGGGTCATTAATCTGAATCTGAAAAATCCAATGTCATTGGATAAAATGGCCAAATTCCTCACAAGGGGCGGCAATATAACAGAATTTGCTGATCCTAAACTAAATGGGGAATACTCGGTGGAAGCTTTTGACCTCACCCTCAAGTTAGCTCTATCATGCACAGCACATAAGCAGCAACGACCATCGATGGAGCAAGTCGTTACAAGACTAGAAAAGGCTCTTCATATCTCAACAAAAGAGAAAGCTCTTACTCCTCTTGCCACACCAACCCGGGTTTGA 1395 0.4294 MNCLTSLKNLEEDVFGCGIESLTSGGGGCSDFYVADVVNKLGNGLRGLEEGCKLSSSGDECDTCLRRFAVLVSLTSNRIEDIKWAQTVYRCLGEQSPTSVQPETNGTKKKKMNTGLWILIGGLIGILIVLIIAAWILLKRRIKKKFSVEKDVSKELLPEEPGSHKIPIKEIYSATNNLNVLNFIGQGIAGKVYKGVLSNGRRVAVKHIINEGYVETFVREVTSLSHVRHPNLVALLGYCEEEDECFLVYELCPNGNLSEWLFGKDKVLSWIQRLEIAIDSARGLWFLHTYPEGCIVHRDIKPTNILLGTTFEAKLSDFGLSKVIDVGQSYVSSEVRGTFGYVDPEYQRNHRVNSSGDVYSFGIVLLQILSGKRVINLNLKNPMSLDKMAKFLTRGGNITEFADPKLNGEYSVEAFDLTLKLALSCTAHKQQRPSMEQVVTRLEKALHISTKEKALTPLATPTRV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00542 464 Pfam Protein kinase domain 180 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00542 464 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 82 444 - -
Eupl11g00542 464 FunFam Serine/threonine kinase protein 138 251 - -
Eupl11g00542 464 SMART serkin_6 178 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00542 464 FunFam probable receptor-like protein kinase At5g59700 252 458 - -
Eupl11g00542 464 SUPERFAMILY Protein kinase-like (PK-like) 161 443 IPR011009 -
Eupl11g00542 464 Gene3D Transferase(Phosphotransferase) domain 1 252 457 - -
Eupl11g00542 464 ProSiteProfiles Protein kinase domain profile. 178 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00542 464 Gene3D Phosphorylase Kinase; domain 1 139 251 - -
Eupl11g00542 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00542 Eupl-Chr11 6742812 6747126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00542 118 446 Receptor kinase-like Gene Family AT3G46400 39.368 3.33e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Eupl11g00542 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00542 - - csin:114274454 607.06