Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00538 ATGAGTAACAAGGTTCTTGGTGTTGCAACACAGATTATGTTGATGGCAATTGTCATTTCTGTGATATTGTTATTTGTGGGAATTGGGTTTTTGGTCTTAATCCATGTCTGTATTGTGGGGAGGGCTTTTAGGAGAGGGTTCAATTCAGGTAATATAATTGAGAGGGGAAGTAACAGAAGCAATAGCATGTCCCATGATGATTTAGAGAAGCTTCCTTGCTTTGATTTTCAGGCAGGAGAGAAGGGGAGTAGTCCTATAGACTGTGCTGTTTGCTTGGACAACTTCAAGATGGGCGATAAGTGTCGATTACTTCCTATCTGTAAGCACAGCTTCCATGCTCAATGTGTCGATTCATGGTTATTGAAGACACCTATATGTCCAATCTGTCGAACCAGTGCTGATTCTCAGAAGGGAAGCACGATTTCGGGCGAGGAAAGTAGTCATTCGGACGAGGTTGGACTTGAATTAAGGGAGAGCCAAGAAGTTGTAGTTGGGACTTAA 501 0.4251 MSNKVLGVATQIMLMAIVISVILLFVGIGFLVLIHVCIVGRAFRRGFNSGNIIERGSNRSNSMSHDDLEKLPCFDFQAGEKGSSPIDCAVCLDNFKMGDKCRLLPICKHSFHAQCVDSWLLKTPICPICRTSADSQKGSTISGEESSHSDEVGLELRESQEVVVGT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00538 166 SMART ring_2 88 129 IPR001841 -
Eupl11g00538 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 140 IPR013083 -
Eupl11g00538 166 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 7 142 - -
Eupl11g00538 166 FunFam RING-H2 finger protein ATL2K 63 136 - -
Eupl11g00538 166 Pfam Ring finger domain 87 130 IPR001841 -
Eupl11g00538 166 MobiDBLite consensus disorder prediction 133 147 - -
Eupl11g00538 166 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Eupl11g00538 166 SUPERFAMILY RING/U-box 87 136 - -
Eupl11g00538 166 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00538 Eupl-Chr11 6703304 6704493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00538 60 144 C3H Transcription Factor Family AT2G18670 41.860 2.54e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00538 - - vvi:100853467 259.225