Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00526 ATGAAGAAGAGTTGCAGCAATGGTTCTTCAAAACTTGACAGAAAGACTGTGGAGAGAAATAGGCGAATGCACATGAAGGGGCTCACCTTCAAGCTCGCTTCTCTCATCCCCAACTACCACAGCTCCTCTAAGGACTCGTTGTCGCAACTAGATCAGTTGGATCATGCAACCTTTTACATAAGGAAATTGCAAGAAAGAATAGAAGAATTGAAGAGAAAGAAGCAATTAGTGATGAGTAGCAAAGAAATTAGTAACTATCATAGCAACGATTCAACGACGACGACTAACTCAAGTTTGCCAGCACTTGAATTAAGAGACTTGGGTTCTACTTTGGAGGTGATTTTGATTAGTGGGTTAAATAAAAGTTTCATGTTCTATGAAGTTATTAGTGTTCTTGAGGAAGAAGGAGCTCAAGTTGTGAATGCTAGCTTCTCTACAGTTGGTGATAAGGTTTTCCACACAATCCATTCTCAGGTCACAAGTTCTAGAGTTGGTGTGGAGACTTCAAGGGTGTGTGAGAGATTGAAGGAGTTGATTTATTAG 543 0.4015 MKKSCSNGSSKLDRKTVERNRRMHMKGLTFKLASLIPNYHSSSKDSLSQLDQLDHATFYIRKLQERIEELKRKKQLVMSSKEISNYHSNDSTTTTNSSLPALELRDLGSTLEVILISGLNKSFMFYEVISVLEEEGAQVVNASFSTVGDKVFHTIHSQVTSSRVGVETSRVCERLKELIY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00526 180 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 180 - -
Eupl11g00526 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 79 IPR036638 GO:0046983
Eupl11g00526 180 Pfam Helix-loop-helix DNA-binding domain 14 64 IPR011598 GO:0046983
Eupl11g00526 180 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 63 IPR011598 GO:0046983
Eupl11g00526 180 Coils Coil 53 80 - -
Eupl11g00526 180 Gene3D - 3 90 IPR036638 GO:0046983
Eupl11g00526 180 SMART finulus 15 69 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00526 Eupl-Chr11 6615709 6618169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00526 1 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.683 2.40e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00526 HLH 4.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00526 - - rcu:8289025 224.172