Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00505 ATGGGTCGAACCTTCTCATGCACATGGTCTCCCATTTATTGTACGTCTCTTGCAATTATTGCCATCGGTTCTAGTGCCACGGGGAGAATTGCTAACTTACTCACGGGTGCACCGTCTTCCCATAAAGAAGGAGATATGTTGCTCTCAACCTGTCAACCATGTCAACAACTTTTTCAAGACCTAATTCTTATAAAGTGTAGTGTTCGGCAAGAAGACAAAGGTGAGCTGCATGGTGAGGACAGCTTACTCAGGTGGTCTCTAATAGCGGGTCGGGTCCCTGGGCGTACTGATAACCAGGTGAAGAACCATTGGAACACTCATTTGAGCAAGAAGCTCGGGATAAAAAAGGGGAAGAGCAAAGTTGGTGTGTCATCAGAAACACTTTTGACAGAATGTAGAGAAGGAAAGGAAACTCTTAGAATTCCTACAGATCAGAATCCGAAGCTTCCAAGTTGTGATGAAAATGGTGGGACCATCGGACCCATAGGGAATGAGGGTTCACAGAGTACACAGGAACCCACGATGAGTGAGTGTTATGTGAATTCTTTATGGTTTTCTAATGATAATTTTAACCTAAATACACCTAGCTTAATGGAGCTTCTAGATGGGAATCCTTTTGATATGGTGTTCCATGACTTGTAA 642 0.4346 MGRTFSCTWSPIYCTSLAIIAIGSSATGRIANLLTGAPSSHKEGDMLLSTCQPCQQLFQDLILIKCSVRQEDKGELHGEDSLLRWSLIAGRVPGRTDNQVKNHWNTHLSKKLGIKKGKSKVGVSSETLLTECREGKETLRIPTDQNPKLPSCDENGGTIGPIGNEGSQSTQEPTMSECYVNSLWFSNDNFNLNTPSLMELLDGNPFDMVFHDL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00505 213 CDD SANT 75 108 IPR001005 -
Eupl11g00505 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 112 IPR017930 -
Eupl11g00505 213 Pfam Myb-like DNA-binding domain 76 108 IPR001005 -
Eupl11g00505 213 SUPERFAMILY Homeodomain-like 76 114 IPR009057 -
Eupl11g00505 213 ProSiteProfiles Myb-like domain profile. 77 108 IPR001005 -
Eupl11g00505 213 Gene3D - 41 134 - -
Eupl11g00505 213 MobiDBLite consensus disorder prediction 141 172 - -
Eupl11g00505 213 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 84 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00505 Eupl-Chr11 6310503 6314488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00505 84 206 MYB Transcription Factor Family AT5G14750 41.935 2.71e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl11g00505 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00505 K09422 - ming:122076027 120.938