Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00497 ATGAAGGTTGGAGGAGACATGAGAGCATTGGAAAGGGCATTGGAATGGTTCAGACCCCTTGTAGGGACGAACAGCTGGGATTACTGCGTGGCTTGGAAGTTGGGGGATGACCCAGCAAGCAGGTTCATAGAATGGATGGGTTGCTGTTGTGGAGGAGCAGAGGAGGATACCCAAGAGGAACGAGATTTGCATTTGTTTCAACCTTGCAGAGATTTGGTCTATCAACACTCTAGAACAACTAAGCCATGTCTTGCTCTTGCCAAATTACCTACTTCCATTCCCTTAAATTCCGGGATTCATGGAGAGGTCCTAATGTCAAACCAACCGAGGTGGCTCAGCCTTGGGGATACTACTCCGGATTCCAATCTTTGTGATGGAACTGTTGGAACTCAAGTTTTGATTCCAGTCGTAGGCGGTCTTGTGGAGCTCTTTGTTGCAAAACATGTACCCAAGGATCAACAGATCATAGAGTTCCTTATGGCTCAGTGCAACATCTCCTGGGAGCAAGATGCCGTGATCATAAGAACACGTACGGAGCAGAGCCTCAATGAACAACCACTCCAGGGTAACATGTACAATTGGCCTCCCTCTATGGACTATTCGAAAATCAGCGGTAGGCATCGTTTTATTCCCTTGGGAACCCGACCCAACTACGATCCTTTCTTTGAAGGATCATCAACAGGTTCAATCCCTTCAGACAATCCACCATCGTTTGATTATCGTGGGTCTCGACAAATTTCGGCATTGGAGCAGTCCCTTAGGAGGATTACCAGTCCAGAGTTGCTCGCTGAATCATCGATATCGAAAGAGCCTGGGTGCAACTATTTAATTAGGCAAGGTTGTGGGGATAGGATGAAGAGGGTAGATAATGTGAAGGTTTTCGAAAGGTCAGAAGGAGATCAGTACCACAAATCAAGGAACCTCATTACAGAGAGGAAAAGAAGGATGAAGATTAAAGATAAGCTTCATGCTTTACGCGCTTTGGTTCCCAAGATTACCAAGGAGTTGCAAAAGAAAGTGAAAGATCTCGAGGATGAGCTAGAGAACATGGAAGAGGAGGAAAACAATGACAATGTCCAATTAGAGACCCCAGACTTAAATGGGATTACCCACAGTGGCACTGCCACGACGACAATGGAAGATCATGGAGCTCGATACGTAAGTCCTAGTGAGAAGATCATGGACTCTTCGAGTGTCGATAACATGGCACGACAAATGGAGGTACAAGTGGAAGTTAGTCAAATTAGTGTAAATGAGTTCTTTCTGAAGTTCTGCTGCGAAAAGAAGCAAGGCGGGTTCGCAAGGTTGATGGAGGCCATGAATTCTCTAGGGCTTCATGTAATTGATGCCAATGTGACAACCTTCAAAGGCAAGGTCTTGAACATTCTGACAGTAGAGGCAGATAATGAAGAGGTTCAAGCTCAACAGGTGAAGGATTCATTGCTCAAGCTAACAAGCAATAGGATTCGGAAGTTGAAGGACGAGGCATAG 1491 0.4567 MKVGGDMRALERALEWFRPLVGTNSWDYCVAWKLGDDPASRFIEWMGCCCGGAEEDTQEERDLHLFQPCRDLVYQHSRTTKPCLALAKLPTSIPLNSGIHGEVLMSNQPRWLSLGDTTPDSNLCDGTVGTQVLIPVVGGLVELFVAKHVPKDQQIIEFLMAQCNISWEQDAVIIRTRTEQSLNEQPLQGNMYNWPPSMDYSKISGRHRFIPLGTRPNYDPFFEGSSTGSIPSDNPPSFDYRGSRQISALEQSLRRITSPELLAESSISKEPGCNYLIRQGCGDRMKRVDNVKVFERSEGDQYHKSRNLITERKRRMKIKDKLHALRALVPKITKELQKKVKDLEDELENMEEEENNDNVQLETPDLNGITHSGTATTTMEDHGARYVSPSEKIMDSSSVDNMARQMEVQVEVSQISVNEFFLKFCCEKKQGGFARLMEAMNSLGLHVIDANVTTFKGKVLNILTVEADNEEVQAQQVKDSLLKLTSNRIRKLKDEA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00497 496 ProSiteProfiles ACT domain profile. 421 496 IPR002912 -
Eupl11g00497 496 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 148 484 - -
Eupl11g00497 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 351 IPR036638 GO:0046983
Eupl11g00497 496 Coils Coil 333 360 - -
Eupl11g00497 496 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 157 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00497 Eupl-Chr11 6203140 6206712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00497 10 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 35.393 1.68e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00497 bHLH-MYC_N 1.8e-16 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00497 - - aew:130778861 363.999