Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00492 ATGGGTCTCACTTCTCTGCAAGTTTGCATGGACACCTCTGAGTGGCTACAGGGTGTGGTTCACGAGGAAAGGAGAATGGATTCTTCTCCACCATCTGGGGGAGACATGATCACATGCTCGAGACCATTGTTAGAGAGGAGACTGAGGCCCCAGCATGACCAAGCTCTCAAGTGTCCAAGGTGTGATTCAACACATACCAAGTTTTGCTACTACAACAATTACAGTCTTTCTCAACCAAGATATTTCTGCAAGACTTGTAGAAGGTATTGGACTAAAGGTGGATCCCTCAGGAACATCCCTGTTGGAGGTGGGTGCAGAAAGAACAAGAGAGTGGTTGGTAATAATGGTAAGAAATCCACTGATCAACCACTTAATCATCATCATCATCAACACCACCACCCCAGTTCATCCTCCCATGATGCAACCCATTTACAACTTTCTTTTCCTCATGAGGGACAATTGTCACACCTCAACAACTTACTGGGAAGCCCTGGAAATCTTGGAAACCCTAATCTCATGGAGACAAAGTACAATGAAATGTTAGAGATCAACCAAAGACAAGTTGATTTCATGGAGAATAAGTTTGATATCATGTTAGGATCAAACCCTAGAAATCATGATTTCTTGGGGAATAGTGACTTGGGTCTTGTGGGTGGCCTAGGAAATGGGTTCACACCTTCTAATTTCCATGGTGTTTGCTCTTCATTTGGAATGTCCTTAGATGGGAACAATGGAGCTTTGATGCTTCCATTTGAAGGAAGTGGGGACGACCCAAATGCAATGGAGATGAAACAAAACAACAGGATGATGTTGTCCCTTGATCAGTGGCAAGATCATCAAGGTTGTTCTGAGGTTGGAAAAGATTCATTTGGGTATCTGAATGGCCTTGGATCATGGACTGGCGTGATGAACGGCTATGGATCTTCTGCAACAAACCAATTAGTCTAG 948 0.4378 MGLTSLQVCMDTSEWLQGVVHEERRMDSSPPSGGDMITCSRPLLERRLRPQHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVVGNNGKKSTDQPLNHHHHQHHHPSSSSHDATHLQLSFPHEGQLSHLNNLLGSPGNLGNPNLMETKYNEMLEINQRQVDFMENKFDIMLGSNPRNHDFLGNSDLGLVGGLGNGFTPSNFHGVCSSFGMSLDGNNGALMLPFEGSGDDPNAMEMKQNNRMMLSLDQWQDHQGCSEVGKDSFGYLNGLGSWTGVMNGYGSSATNQLV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00492 315 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Eupl11g00492 315 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Eupl11g00492 315 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Eupl11g00492 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 45 196 IPR045174 GO:0003700|GO:0006355
Eupl11g00492 315 MobiDBLite consensus disorder prediction 107 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00492 Eupl-Chr11 6161369 6162834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00492 49 126 C2C2-Dof Transcription Factor Family AT5G60200 70.370 3.19e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl11g00492 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00492 - - nnu:104587224 457.218