Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00485 ATGGTCGAGGTGAGAAATCGAAAATTAGGGTGCAGAGATGACGACGCGATTGAAGAAGAACAGAAAGAAGAGAGGCACGTGAGCGCCGGTCATGGGCGTATCGGGAAGCATCGAAAGCACCCTGGAGGACGTGGTAATGCAGGAGCCTCCCCCGACAATGCTCCCCTCCTCGACGTCACCCAGTACGGTTACTTCAAGGTCTTAGGCAAGGGAGTCTTGCCCTCATCTCAGCCTATCGTCGTTAAGGCCAAGCTCATCTCCAAGATTGCCGAGAAGAAGATCAAGGAGGCTGGTGGTGCTGTCGTCCTCACCGCCTAA 318 0.5472 MVEVRNRKLGCRDDDAIEEEQKEERHVSAGHGRIGKHRKHPGGRGNAGASPDNAPLLDVTQYGYFKVLGKGVLPSSQPIVVKAKLISKIAEKKIKEAGGAVVLTA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00485 105 MobiDBLite consensus disorder prediction 1 53 - -
Eupl11g00485 105 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 63 102 IPR021131 -
Eupl11g00485 105 SUPERFAMILY Ribosomal proteins L15p and L18e 26 104 IPR036227 -
Eupl11g00485 105 Gene3D - 17 105 - -
Eupl11g00485 105 MobiDBLite consensus disorder prediction 1 30 - -
Eupl11g00485 105 PANTHER 60S RIBOSOMAL PROTEIN L27A 52 105 - -
Eupl11g00485 105 ProSitePatterns Ribosomal protein L15 signature. 66 98 IPR001196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00485 Eupl-Chr11 6074789 6081485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00485 16 105 Cytoplasmic Ribosomal Protein Gene Family AT1G23290 48.951 5.13e-36 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00485 K02900 - ming:122075827 119.783