Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00465 ATGGGAAGGACGGGTTTCCTTTTATGGAGGGTGGGTTTGCTGGTTTTGGCATTGATGGACGGGTCTTCTGCAACTCTTTCTCCTTCTGGCATAAACTATGAAGTTGTAGCTTTGATGGCGATAAAACGTGATCTAAACGACCCGTATAATGTATTGGAGAACTGGGATATCAATTCGGTAGATCCTTGTAGCTGGAGGATGATAACCTGCTCTGCGGAAGGCTATGTTTCTGCTCTAGGGCTGCCTAGTCAGAGATTGTCCGGGACCTTATCACCAGGGATTGGAAACCTCACTAAACTGCAAACTGTGTTGCTGCAGAATAATGCCATTTCTGGTCCAATTCCTGCTGACATTGGAAAGCTGGATAAGCTACAAACACTTGATCTCTCAAACAATAAGTTCAGTGGTGGCATACCAAGTTCGTTGGGGGACCTTAAGAACCTGAATTATCTGCGACTAAATAAAAACAGCCTTTCTGGACCCTGCCCTGTTTCTCTGTCCAACATTGAAGGTCTCACACTTGTGGACCTTTCTTATAACAATCTAAGTGGTTCCTTGCCAAAAACATCAGCAAGAACTTTCAAAATTATTGGAAACCCTTTAATTTGTGGGACAAATTCAGAGAACAACTGTTCTACTGTGTCTTCTGAGCCACTTTCCTTCCCACCAGATGCTCTAATAGATCAATCACAACCAGGAGGGACAAGAAACCACAGGGTAGCTATTGCATTTGGTTCAAGTGTCGGGTCTGTTTCTTTAATTATCATTGCTGTTGGGTTGCTTCTTTGGTGGAGATATAGACACAGCCAGCAGGTTTTCTTTGATGTCAATGATCAAAATGATCCAGAGGTATGCTTGGGTAATTTGAAGAGATATTCCTTTAAGGAGCTCCGAATGGCCACCGACCATTTCAATCCCAAGAACATTTTAGGGGTGGGTGGATACGGAATTGTGTACAAGGGATGCTTGCAAGATGGGACTCTGGTGGCTGTTAAAAGGTTGAAAGACTGTAATGCTGTTGGTGGTGAAGTCCAATTCCAGACAGAAGTTGAGATGATAAGTTTAGCCATCCATCGGAATCTCCTCCGGCTTTGTGGGCTCTGTACAACCGAGAATGAACGACTTCTCGTCTACCCTTATATGCCAAATGGAAGTGTTGCATCTCGATTAAGAGATCATGTTCATGGTAAGCCCGCTTTAAACTGGTCAAAGCGAAAGAGGATAGCATTAGGGACAGCAAGGGGGTTACTATATCTGCATGAACAATGTGACCCCAAAATTATTCACCGTGACGTGAAAGCAGCCAACATTCTTCTTGATGAAGATTTTGAGGCAGTCGTCGGAGATTTTGGGTTGGCAAAGCTCTTGGATCATCATGATTCTCACGTATCCACAGCCGTGCGTGGGACCGTTGGCCATATAGCTCCAGAGTACCTATCTACAGGCCAATCGTCGGAAAAGACAGACGTGTTTGGCTTTGGGATCTTGCTCCTAGAACTAATTACAGGTCAGAAGGCTTTGGATTTTGGGCGGGTGGCAAACCAGAAAGGAGTGATGCTTGATTGGGTGAAGAAGCTTCATCAGGAGGGAAAGCTCAATCTAATGGTGGATAAGGATCTAAAGAACACTTTTGACAGGGTAGAGTTAGAAGAGATGGTTCAGGTTGCTCTTCTGTGTACCCAATTCCATCCATCTCACCGCCCGAAAATGTCTGAAGTGGTGAGGATGTTAGAAGGTGACGGCCTTGCCGAGAAATGGGAGGCCTCACAGAAAGTTGATACACCAGGATCCCGATCATCAGAGAACTTGCCTCAGAGATATTCAGACTTTATAGAGGAATCTTCGTTCATTATTGAGGCAATGGAGCTTTCTGGACCAAGATGA 1884 0.4475 MGRTGFLLWRVGLLVLALMDGSSATLSPSGINYEVVALMAIKRDLNDPYNVLENWDINSVDPCSWRMITCSAEGYVSALGLPSQRLSGTLSPGIGNLTKLQTVLLQNNAISGPIPADIGKLDKLQTLDLSNNKFSGGIPSSLGDLKNLNYLRLNKNSLSGPCPVSLSNIEGLTLVDLSYNNLSGSLPKTSARTFKIIGNPLICGTNSENNCSTVSSEPLSFPPDALIDQSQPGGTRNHRVAIAFGSSVGSVSLIIIAVGLLLWWRYRHSQQVFFDVNDQNDPEVCLGNLKRYSFKELRMATDHFNPKNILGVGGYGIVYKGCLQDGTLVAVKRLKDCNAVGGEVQFQTEVEMISLAIHRNLLRLCGLCTTENERLLVYPYMPNGSVASRLRDHVHGKPALNWSKRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHHDSHVSTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRVANQKGVMLDWVKKLHQEGKLNLMVDKDLKNTFDRVELEEMVQVALLCTQFHPSHRPKMSEVVRMLEGDGLAEKWEASQKVDTPGSRSSENLPQRYSDFIEESSFIIEAMELSGPR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00465 627 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Eupl11g00465 627 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Eupl11g00465 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Eupl11g00465 627 SUPERFAMILY L domain-like 32 193 - -
Eupl11g00465 627 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00465 627 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Eupl11g00465 627 Gene3D Transferase(Phosphotransferase) domain 1 381 596 - -
Eupl11g00465 627 FunFam Somatic embryogenesis receptor-like kinase 1 381 597 - -
Eupl11g00465 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Eupl11g00465 627 Pfam Protein tyrosine and serine/threonine kinase 308 577 IPR001245 GO:0004672|GO:0006468
Eupl11g00465 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 588 - -
Eupl11g00465 627 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Eupl11g00465 627 SUPERFAMILY Protein kinase-like (PK-like) 281 578 IPR011009 -
Eupl11g00465 627 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Eupl11g00465 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Eupl11g00465 627 ProSiteProfiles Protein kinase domain profile. 304 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00465 Eupl-Chr11 5824885 5829986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00465 26 627 Receptor kinase-like Gene Family AT5G16000 67.103 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl11g00465 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00465 - - nnu:104593152 1097.03