Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00464 ATGATGGAAGATATGTACGGTCTCAATCCGATGGTGAATTACTCAGAACAGGTTTCAATGTCACCAGAAAATCTGGTTTATGCGTCGGATTACCAGAGCTTGCTTTCCTCGGGAGCTTTTCGCGATCGGATTCCGGTTTTTTCCCCCGATCAGTTGTTCTCTATGACTGCGACTTCGGCGATATCTGAGGCTGCTTCGATCACGCCTGAAATTCAAGGAGTACGAGAAGAAGAGCTTTCGAGTGCGATCAAAGCCAAAATCGCTTCTCATCCTCGTTACCCTAGATTGCTCCAAGCTTTCGTCGATTGCCAGAAGGTTGGAGCGCCTCCGGAAATAGCATGTCTGTTAGAAGAAATCCAGCGAGAAAACGTTTGCAAGAGAAACACCGTTTCAACTCGCTTAGGCGCCGATCCCGAGCTCGACCAGTTCATGGAAACTTACTGTGAAATACTAGTTAAGTATAAATCAGATCTCACAAGACCTTTTGATGAAGCAGCCACGTTCTTGAACAAAATAGAAATGCAACTCACAAATCTCTGCAGCAATGGAGCTTCCAGAAGCTGTGTTTCGGATGAGGTTGCTGTATCTTCCGAGGAGGATTTGAGTGGAGGAGATGAGGTAGAAGTTCAAGAAGCTCACCCGAGATGTGAAGACCGAGACATTAAGGATAAGCTTTTACGTAAATATAGTGGTTATATTAGTAGCCTGAAGCAGGAATTTTCGAAGAAGAAGAAGAAGGGAAAATTGCCAAAAGAAGCAAGGCAGACACTCCTTGACTGGTGGAACATCACTATAAATGGCCATACCCAACGGAAGGTGATAAGATCGCGCTGGCAGAAACAACGGGGCTAG 852 0.4554 MMEDMYGLNPMVNYSEQVSMSPENLVYASDYQSLLSSGAFRDRIPVFSPDQLFSMTATSAISEAASITPEIQGVREEELSSAIKAKIASHPRYPRLLQAFVDCQKVGAPPEIACLLEEIQRENVCKRNTVSTRLGADPELDQFMETYCEILVKYKSDLTRPFDEAATFLNKIEMQLTNLCSNGASRSCVSDEVAVSSEEDLSGGDEVEVQEAHPRCEDRDIKDKLLRKYSGYISSLKQEFSKKKKKGKLPKEARQTLLDWWNITINGHTQRKVIRSRWQKQRG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00464 283 SMART KNOX2_2 130 181 IPR005541 GO:0003677|GO:0005634
Eupl11g00464 283 ProSiteProfiles ELK domain profile. 220 240 IPR005539 GO:0003677
Eupl11g00464 283 SMART ELK_2 220 241 IPR005539 GO:0003677
Eupl11g00464 283 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 72 181 - -
Eupl11g00464 283 Pfam KNOX2 domain 134 180 IPR005541 GO:0003677|GO:0005634
Eupl11g00464 283 SMART KNOX1_2 81 125 IPR005540 GO:0003677|GO:0005634
Eupl11g00464 283 Pfam KNOX1 domain 82 123 IPR005540 GO:0003677|GO:0005634
Eupl11g00464 283 Pfam ELK domain 220 241 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00464 Eupl-Chr11 5797087 5806726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00464 2 263 Homeobox Transcription Factor Family AT1G23380 60.223 8.73e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00464 - - msin:131234751 338.961